Pairwise Alignments

Query, 528 a.a., ABC transporter, nucleotide binding/ATPase protein (ribose) from Agrobacterium fabrum C58

Subject, 500 a.a., ribose ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  273 bits (697), Expect = 1e-77
 Identities = 172/516 (33%), Positives = 275/516 (53%), Gaps = 41/516 (7%)

Query: 5   ILSVESLTHSFGPSPALRDINLAIRSGEVVGIVGENGAGKSTLLNVLSGTLKPSRGTVAI 64
           +L + ++  SFG    L  ++L  R+GEV  ++GENGAGKSTL+ +L G L+PS GT+ I
Sbjct: 1   MLELNAIRKSFGKIEVLHGVDLEARAGEVHALLGENGAGKSTLMKILCGILQPSEGTIRI 60

Query: 65  GGTPVALENYYEANQRGIWRIFQDPALIGALPVYESLFLGHEKRFTRFGVLNKAKMIDIA 124
            G      NY EA   G+  +FQ+ +LI  L   E++FL  E R     +LNK  M   A
Sbjct: 61  DGKDRRFANYDEAIAAGVGIVFQEFSLIPYLNAVENMFLAREIRGP-LRLLNKGAMRKRA 119

Query: 125 RDLVRSMGIAVDVKHLMLNYDFATRQSLEVCRAILLPKVLGLPSGFVLFDEPTTGLSRAE 184
            +++  + + V +   +     A +Q +E+ +A      L L +  ++ DEPT  L+ +E
Sbjct: 120 AEIMGRLAVDVPLDVPVHRLSVAQQQFVEIAKA------LSLDARILVLDEPTATLTPSE 173

Query: 185 VVRLLESMGRLRRQGAGVAFVSHRLQEVFDVCDRLIVLKDGAIVGEGPISQFDEAGLHRL 244
              L   M  LRRQG  + F+SH L E+F++CDR+ VL+DG ++G    S+ D   L  +
Sbjct: 174 TEHLFNVMRELRRQGVAIIFISHHLDEIFEICDRITVLRDGELIGSCLTSEVDNDRLVEM 233

Query: 245 MVGRAFESTTPGK-------RSTLNEEPFLVVKGLSRSSRPSAGQRLTHLTDISFNVGKG 297
           MVGR  E++ P K          +  E   + KG   S                F++ KG
Sbjct: 234 MVGRRIEASFPPKPQIDPSAAKVIEVEELQLKKGGPVSR---------------FSLRKG 278

Query: 298 EIVGIGGLLGSGKGQLLRVLAGVTSHRDGTVELGGMP--LAGSIAQRKQKGIAFIPGDRS 355
           EI+G  GL+GSG+ + +  + G  S     ++L G+   L+G       +GI  +P  R 
Sbjct: 279 EILGFAGLVGSGRTETVLAMLGAHSASRRKIKLDGVDTRLSGP-DDALMRGIGLLPESRK 337

Query: 356 NEAVVVTADVASNISLPSGHAGARGFSNAFGIWRSAREQNVARQMIVSLRIKAVSGQP-L 414
            E ++ +  +  NISL +     R +  A       +E     + +  +++KA      +
Sbjct: 338 EEGLITSFSILQNISLNN----YRKYRKAHWFLDLKKELEHTTKAMAQVQVKAQGPYARV 393

Query: 415 RTLSGGNQQKVSLARWIHREPVLLLIENPTAGVDVGAKREIYALLRDLTAHGTSILYVTD 474
            TLSGGNQQK+ +ARW++ +  +L+ + PT G+DVGAK EIY+L+R+  A G SI+ ++ 
Sbjct: 394 DTLSGGNQQKIVIARWLNHDMRVLIFDEPTRGIDVGAKAEIYSLMREFAARGHSIIMISS 453

Query: 475 DLPELISLSDRILIMRDGRIVSDID----NRQTLTT 506
           +LPE+I +SDR+ + R G IV+ ++    N +T+ T
Sbjct: 454 ELPEVIGMSDRVCVFRSGGIVATVEGEDINSETIMT 489