Pairwise Alignments

Query, 320 a.a., ABC transporter, substrate binding protein (nitrate/sulfonate) from Agrobacterium fabrum C58

Subject, 328 a.a., putative ABC transporter, periplasmic substrate-binding protein from Pseudomonas putida KT2440

 Score =  144 bits (364), Expect = 2e-39
 Identities = 97/295 (32%), Positives = 159/295 (53%), Gaps = 16/295 (5%)

Query: 12  ALVAAALL-WAGSAA--AETVNIGFMPFVPYSAILLAKQKGWVDEEFTKAGLKDVEIKWH 68
           A VA+ALL W+ + A  A T+ IG+  F   ++I + K  G +++     G+K   + WH
Sbjct: 21  ASVASALLPWSEAIADDARTLRIGYQKF---NSINILKGSGALEKALAPQGVK---VSWH 74

Query: 69  QFAGGPPVNEAFASGALDIAALGDTPSLIAFANGIDTRFVGLACKGAKAEALIVLKDSSV 128
           +FA GP + EA ++GA+D+    D PS+ A A G    ++       +   L+V +   +
Sbjct: 75  EFAAGPQLLEALSTGAIDLGHAADAPSVFAQAAGKPVVYLAAEQPYPRGIGLVVREQDHL 134

Query: 129 KTVKDLKGKKVATLRGGNVHELLVLVLAEAGLKISDV--EFLNLGLQDMGIALTKGDVDA 186
            +V+DLKGK+VAT RG N   LL + L +AGL   D+   ++N    D   AL  G V A
Sbjct: 135 ASVQDLKGKRVATGRGWNAQYLLAVALQQAGLSYKDITPAYVN-NAADAVAALQSGSVQA 193

Query: 187 VLVWEPLLTKLDSEGVSRTLRDGAGLKSNLNPIVALGSFAAKHPDVLKAYLQAVKRGAEA 246
           V +W+P L   +S+   + LRDG+GL +N    ++  SFA +H  +LK +   + + ++ 
Sbjct: 194 VTLWDPFLAAAESQPGLKNLRDGSGLSNNRTFYLSTASFADQHRALLKTFFAELGKVSQW 253

Query: 247 LRSDPAGSAQVLAPVVGLTPKQTELAFSRFEWKPTVTE----ADQAELADSVKFL 297
             + PA  A +LAP +G++ +  E+A  R  +          A+Q +LAD+ + L
Sbjct: 254 ANAKPAEVAALLAPQLGISTQVLEVASERRNYNAVAITPQIVAEQQKLADTFQGL 308