Pairwise Alignments

Query, 320 a.a., ABC transporter, substrate binding protein (nitrate/sulfonate) from Agrobacterium fabrum C58

Subject, 318 a.a., putative Periplasmic aliphatic sulfonate-binding protein from Pseudomonas putida KT2440

 Score =  123 bits (308), Expect = 7e-33
 Identities = 87/299 (29%), Positives = 152/299 (50%), Gaps = 11/299 (3%)

Query: 1   MLKKNIAKTATALVAAALLWAGSAAAETVNIGFMPFVPYSAILLAKQKGWVDEEFTKAGL 60
           M  K + +   AL+A+ALL + ++A +T+ IG+      + + L K +G +++     G+
Sbjct: 1   MTFKPLRQLGLALLASALLPSLASAEQTLRIGYQK--SSTLLTLLKARGTLEQRLQAEGI 58

Query: 61  KDVEIKWHQFAGGPPVNEAFASGALDIAA-LGDTPSLIAFANGIDTRFVGLACKGAKAEA 119
           +   + WH+F  G P+ EA   G +D++A + DT  +   A G    +         A+A
Sbjct: 59  R---VTWHEFPSGLPLLEALNLGNVDLSADVADTVPVFTQAAGAKLTYFAREAPSPTAQA 115

Query: 120 LIVLKDSSVKTVKDLKGKKVATLRGGNVHELLVLVLAEAGLKISDVEFLNLGLQDMGIAL 179
           ++V  DS +KT+ DLKGK+VA  +    H LL+  LA+AGL   D+    L   D   A 
Sbjct: 116 ILVPADSPLKTLADLKGKRVAVTKAAGSHYLLIQALAKAGLTFKDITPAYLIPADGRAAF 175

Query: 180 TKGDVDAVLVWEPLLTKLDSEGVSRTLRDGAGLKSNLNPIVALGSFAAKHPDVLKAYLQA 239
               VDA + W+P +     +  +R L DG+ L S     +A   +A  HP+VL+    A
Sbjct: 176 ENHKVDAWVTWDPYVASAQRQQNARILVDGSELASYQRYYLAGSDYAKAHPEVLQQVYLA 235

Query: 240 VKRGAEALRSDPAGSAQVLAPVVG-LTPKQTELAFSR--FEWKPTVTE--ADQAELADS 293
           ++      +++P  +A++L P+ G L     + A +R  ++ +P   +  A+Q  +AD+
Sbjct: 236 LREAGAWTKANPEAAARILGPLWGNLDSATVQQANARRSYDVQPVKLDNLAEQQRIADA 294