Pairwise Alignments

Query, 320 a.a., ABC transporter, substrate binding protein (nitrate/sulfonate) from Agrobacterium fabrum C58

Subject, 321 a.a., putative Periplasmic aliphatic sulfonate-binding protein from Pseudomonas putida KT2440

 Score =  119 bits (299), Expect = 7e-32
 Identities = 94/298 (31%), Positives = 138/298 (46%), Gaps = 27/298 (9%)

Query: 8   KTATALVAAALLWAGSAAAE---TVNIGFMPFVPYSAILLAKQKGWVDEEFTKA-GLKDV 63
           +T    VA ALL AG A+A    T+ IG              QKG +  +   A  L+D+
Sbjct: 4   RTKLLTVAVALLLAGHASASERLTLRIG-------------DQKGNMRAQLEAADALRDL 50

Query: 64  --EIKWHQFAGGPPVNEAFASGALDIAALGDTPSLIAFANGIDTRFVGLACKGAKAEALI 121
             +I+W +F    P+ EA  +GA+D   +GD P L   A+G   + + +        AL+
Sbjct: 51  PYDIRWAEFPAAAPLAEALNAGAIDAGIIGDAPLLFVLASGAPVKAIAVDKSDPYGTALL 110

Query: 122 VLKDSSVKTVKDLKGKKVATLRGGNVHELLVLVLAEAGLKISDVEFLNLGLQDMGIALTK 181
           V  ++ +++  +LKGK++AT RG   H L +  LA+AGL   DVEF  LG  D  IAL  
Sbjct: 111 VRPEAPLRSAAELKGKRIATGRGSIGHHLALKALAQAGLTEKDVEFRFLGPVDAKIALAN 170

Query: 182 GDVDAVLVWEPLLTKLDSEGVSRTLRDGAGLKSNLNPIVALGSFAAKHPD---VLKAYLQ 238
           G VDA   WEP     +  G  R L +G GL +  N  +A    A + P     L+ YL 
Sbjct: 171 GSVDAWSTWEPYTALAELSGQGRVLVNGRGLSTG-NSFLAATDKALEEPGRRAALQDYLN 229

Query: 239 AVKRGAEALRSDPAGSAQVLAPVVGLTPKQTELAFSR--FEWK--PTVTEADQAELAD 292
            +              ++ LA ++G   +   L F R    W+   T T  +Q + AD
Sbjct: 230 RLAAAQVWANQHLDTYSKTLAAIIGFPVEAARLQFERRQLRWQVIDTQTVTEQQDTAD 287