Pairwise Alignments

Query, 320 a.a., ABC transporter, substrate binding protein (nitrate/sulfonate) from Agrobacterium fabrum C58

Subject, 312 a.a., putative Periplasmic aliphatic sulfonate-binding protein from Pseudomonas putida KT2440

 Score = 99.8 bits (247), Expect = 8e-26
 Identities = 78/285 (27%), Positives = 132/285 (46%), Gaps = 12/285 (4%)

Query: 12  ALVAAALLWAGSAAAETVNIGFMPFVPYSAILLAKQKGWVDEEFTKAGLKDVEIKWHQFA 71
           A    A  ++ +AAA+T+ +G      Y+A  + +  G +++           ++W QF 
Sbjct: 8   AATVLATTFSLAAAAQTLVVGDQS---YNARAVMEAAGVLEQ-------LPYTLEWKQFT 57

Query: 72  GGPPVNEAFASGALDIAALGDTPSLIAFANGIDTRFVGLACKGAKAEALIVLKDSSVKTV 131
            G PV EA   G+LDI  LGD P L   A G   + + ++ +  +  A++  KDS + ++
Sbjct: 58  AGSPVAEALNVGSLDIGLLGDAPPLFLGALGAPIKVIAVSRQNLEGVAILARKDSPIHSL 117

Query: 132 KDLKGKKVATLRGGNVHELLVLVLAEAGLKISDVEFLNLGLQDMGIALTKGDVDAVLVWE 191
           +DL+GK+ A  +G    +LL   L +AG+    VE   L   D   AL  G VD +  WE
Sbjct: 118 QDLRGKRAAIWKGSWSQQLLFSALDKAGVPRDAVELRYLSALDASHALDGGSVDVIATWE 177

Query: 192 PLLTKLDSEGVSRTLRDGAGLKSNLNPIVALGSFAAKHPDVLKAYLQAVKRGAEALRSDP 251
           P +T+ + +G +R L    G+    + +VA           +  +LQ +K+  +   S P
Sbjct: 178 PYVTQQERQG-ARVLATADGVIPAQSFVVANSKAVELKRAQIADFLQRLKKARDWTLSAP 236

Query: 252 AGSAQVLAPVVGLTPKQTELAFSRFEWKPT-VTEADQAELADSVK 295
           A +         LT    ++A + F    T +   D   +AD+ K
Sbjct: 237 ANTEAYADAWAKLTRADRDIARAWFARARTDLAPLDPQVIADAQK 281