Pairwise Alignments

Query, 320 a.a., ABC transporter, substrate binding protein (nitrate/sulfonate) from Agrobacterium fabrum C58

Subject, 321 a.a., ABC transporter, substrate binding protein (aliphatic sulfonate) from Agrobacterium fabrum C58

 Score =  145 bits (367), Expect = 1e-39
 Identities = 88/254 (34%), Positives = 137/254 (53%), Gaps = 10/254 (3%)

Query: 24  AAAETVNIGFMPFVPYSAILLAKQKGWVDEEFTKAGLKD--VEIKWHQFAGGPPVNEAFA 81
           AA  T+ IG+        I LAK +G ++     A LKD  +E+KW +F+ GPP+ EA  
Sbjct: 28  AATTTLRIGWQK---NGVIALAKSQGALE-----ALLKDRGIEVKWSEFSSGPPLLEALG 79

Query: 82  SGALDIAALGDTPSLIAFANGIDTRFVGLACKGAKAEALIVLKDSSVKTVKDLKGKKVAT 141
           +GALDI   GD P L A A G + R+VG     A   A++V KDS +KT++DLKGKKVA 
Sbjct: 80  AGALDIGPTGDVPPLFAQAAGGNLRYVGTYKAAAGGSAILVQKDSPLKTLEDLKGKKVAF 139

Query: 142 LRGGNVHELLVLVLAEAGLKISDVEFLNLGLQDMGIALTKGDVDAVLVWEPLLTKLDSEG 201
            RG + H + V  L +AGL +SD+  ++L   D   A   G +DA  +W+P     + E 
Sbjct: 140 KRGSSAHNVTVKALRKAGLTLSDITPVDLAPPDAAAAFRSGSIDAWSIWDPYFAVAEKEP 199

Query: 202 VSRTLRDGAGLKSNLNPIVALGSFAAKHPDVLKAYLQAVKRGAEALRSDPAGSAQVLAPV 261
            +R L    G+    +  +A G F   +PD++   L+ +       +++   +A+ LA +
Sbjct: 200 TTRVLSTAEGIVDPWSYFLANGDFVEANPDLVPLILKELANVGAKAQANIDATAKSLAAI 259

Query: 262 VGLTPKQTELAFSR 275
            G+    T+++ +R
Sbjct: 260 TGVPEDVTKVSLTR 273