Pairwise Alignments

Query, 836 a.a., conserved hypothetical protein from Agrobacterium fabrum C58

Subject, 842 a.a., DEAD/DEAH box helicase family protein from Rhodanobacter sp000427505 FW510-R12

 Score =  394 bits (1013), Expect = e-114
 Identities = 258/816 (31%), Positives = 416/816 (50%), Gaps = 34/816 (4%)

Query: 1   MVDFKKLREDKAKPKPVAPRDIFHSLPKAVGINDLYVSQAEALDAWYPSRRNDKDVVVKL 60
           MVDFKK R      KPV P +I+  L +A     L  +Q   L  W+ + R + DV++KL
Sbjct: 1   MVDFKKKRVAGPAGKPVEPTEIYERLDRASDKGPLRAAQERVLQDWHLNFRRNNDVILKL 60

Query: 61  HTGGGKTLVALLMAQSTMNELGEPVLYLAPTTQLVEQVIAKATEYGIRAVPYTRGQPLAS 120
           HTG GKTLV LLM QS +NE G   +YL P   L  Q + +A ++GI          L S
Sbjct: 61  HTGQGKTLVGLLMLQSKINESGGRAIYLCPNNFLARQTLIQAKQFGITCTDADDDGNLPS 120

Query: 121 EFLDGNAVLVGAYESLFSGRSKFGVRGSAKPAVKVGGIILDDAHVALSSVRKAFSLTITS 180
            FLDG A+LV   + LF+G +KF +      + +V  I++DDAH  + S+R A  +T+  
Sbjct: 121 SFLDGRAILVVTVQKLFNGLTKFNL---GARSTEVDYIVIDDAHACIDSIRSACQITLPR 177

Query: 181 KDHLEVYQEMADRFRGAFDEVGRGGAFADITRGKDFG---VIEVPSWAWLSKVPEVREFL 237
           K   E YQ + + F     + G  G++ +I +  D G   ++ VP WAWL +  EV   L
Sbjct: 178 KH--EAYQHIVNLFEDDLRKQG-VGSYEEIRQANDRGPSPILPVPYWAWLDREEEVTRIL 234

Query: 238 SQHVEGVD-PYIWPLLRDNLAMCHCLFSRKSVTITPTFPPVDLLPTFDDAKRRIYMSATI 296
           ++  +  +  ++WP+LRD + +C C+ S + + I P  PP+++  ++ +AK RI+MSAT+
Sbjct: 235 ARANQTKELKFVWPILRDKIKLCQCVVSSEQIIIIPHIPPLEMFGSYANAKHRIFMSATV 294

Query: 297 SDDSEIVRTFGASPAAVGRPIQSSSLAGVGERMILVPELMPLG---NVAITPMVKQIAKW 353
           +DD+ +++  G     V  P++       GERM+L+P ++         +    K  AK 
Sbjct: 295 TDDAFLIKGLGLDRNVVTAPLRDPKETWSGERMLLIPSIISTDLDEGYVMANFGKPDAK- 353

Query: 354 IAGYAGVAILAPSGTVAKGWLDTAEYPETSEAVSHRIKDMQAGSFKGPIVLANRYDGIDL 413
                   +L PS   +KGW  +     ++  +   +  ++ G  +  + +ANRYDGIDL
Sbjct: 354 --RRYNTVVLTPSFNSSKGWEASGAVVASTNTIDQLVDALRNGIIQTTLTVANRYDGIDL 411

Query: 414 AGQSCRLLIMDGLPQGTTDYDMFRTNVLADSAVNSL-LAQRIEQGLGRGSRGGGDFCVVV 472
             ++CR+LI+DG P G T ++ +      +S +++  +A+ IEQGLGR  RG  D+CVV+
Sbjct: 412 PDEACRILILDGKPYGETLWERYVEECRPESQISAARIARTIEQGLGRAVRGEKDYCVVL 471

Query: 473 LTGSDLVAWIGRKKNLEHLTASSRVQLNVGQEVS-EAVASYQEIGET-------MLKCLN 524
           +TGSDLV  I  ++  +HL+  ++ Q+ +G E+S EA A  Q  G +       + +CL 
Sbjct: 472 ITGSDLVRSIRSREIQDHLSDQTKAQVRLGLEISEEAQADVQNAGTSHSALMALIRQCLE 531

Query: 525 RDPDWVAYHASELAAATRPPGIDELSLKVAGAERRAFRLERVGQYESAIQELEHLISS-P 583
           R+ DW  ++  E   +  P  +    L +  AER A     +G+Y+ AI  ++ ++   P
Sbjct: 532 RNEDWKEFY-KETMDSLSPQALISGLLDIFTAERLAEVDFSLGRYQQAIARIQAILDKYP 590

Query: 584 DLVQDGQRRAWLSSLAARIAFHMNDDHKG-QRLQTSAFATNNNHIPPRIRPAYIPRPMAG 642
           D+      R W    AAR  +   + H G Q  Q  A   N   + P   P      +A 
Sbjct: 591 DMA--STERGWYLQEAAR--YEYLESHAGAQAKQAGAHRLNRLLLKPESIPILKLSAIAQ 646

Query: 643 PQSMAIVSRILEYQRRGSLIPAYNEAVSALVPDASPFQYEEALKNLGAYLGFDAERPEAV 702
            +S++IV  +  +Q   +L  A ++  ++L       Q+E A   LGA LGF +ERP+  
Sbjct: 647 KRSISIVKWVQNFQSNENLRLAVDDITNSLKFGVRAEQFERAWHELGAALGFASERPDKE 706

Query: 703 HKTGPDVLWRTSGLFDFVIEAKSDKEKDNP-LYKNDHAQLLEAEQWFRRCYPGRQSLRVS 761
            K GPD LW        ++E K++ E     + K++  QL  A  WF R Y G +S  V 
Sbjct: 707 WKEGPDNLWALKAGNYLLVECKNEVELTRAHINKDESGQLNNACAWFDREYVGCESTNVL 766

Query: 762 ALPE-PIADRKASTQGTYALKLEEVTKLVGAVRNLY 796
            +P   +       +    ++  ++ K + +VR  Y
Sbjct: 767 IIPTVKLGPGAGFNKDVRIMRKRDLNKFIHSVRTFY 802