Pairwise Alignments

Query, 323 a.a., conjugal transfer protein from Agrobacterium fabrum C58

Subject, 328 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  270 bits (691), Expect = 3e-77
 Identities = 148/297 (49%), Positives = 195/297 (65%), Gaps = 4/297 (1%)

Query: 8   SRLVRKLQDALGDQLCVALDDATVVEIMLNPDGKLFIERLGHGVAPAG-LLSPAAAEVII 66
           +R VR L+ ALG  +   LDD  VVE+MLNPDG+L+++RL  G+A  G  L     E II
Sbjct: 12  TRGVRMLRTALGPVISRLLDDPAVVEVMLNPDGRLWVDRLSEGLANTGERLVTGDGERII 71

Query: 67  GSVAHALQSEADDEQPIISGELPIGGHRFEGLLPPVVSGPSFTIRRRASRLIPLDDYVKH 126
             VAH + +E     P +S ELP  G RFEGLLPPVV+ P+F IR+ A  +  LDDYV  
Sbjct: 72  RLVAHHIGAEVHAGAPRLSAELPGNGERFEGLLPPVVAAPTFAIRKPAVAVFTLDDYVDA 131

Query: 127 KIMTAAQVSVLRSAIASRMNIVISGGTGSGKTTLANAVIAEIVANAPDDRIVILEDTAEI 186
            IM A Q   LR  IASR NI+++GGT +GKTTL NA++AE+      +RI+++EDT E+
Sbjct: 132 GIMLAGQAEALRHGIASRANILVAGGTSTGKTTLTNALLAEVAKTY--ERIILIEDTREL 189

Query: 187 QCAAENAVALHTSDTI-DMARLLKSTMRLRPDRIIVGEVRDGAALTLLKAWNTGHPGGVT 245
           QCAA N VA+ T D +  ++ L++S++RLRPDRI +GEVR   AL LLKAW TGHPGG+ 
Sbjct: 190 QCAAPNLVAMRTKDGVASLSDLVRSSLRLRPDRIPIGEVRGAEALDLLKAWGTGHPGGIG 249

Query: 246 TIHSNTAMSALRRLEQLTAEVSQQPMQEVIGEAVDLIVSIERTGKGRRVREVIHVEG 302
           TIH+ +A+  LRRLEQL  E      + +I E +DLI  +   G  RR+ E+  VEG
Sbjct: 250 TIHAGSAIGTLRRLEQLIQEAVVTVPRALIAETIDLIAVLSGRGAARRLSELARVEG 306