Pairwise Alignments

Query, 323 a.a., conjugal transfer protein from Agrobacterium fabrum C58

Subject, 328 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  270 bits (691), Expect = 3e-77
 Identities = 147/297 (49%), Positives = 197/297 (66%), Gaps = 4/297 (1%)

Query: 8   SRLVRKLQDALGDQLCVALDDATVVEIMLNPDGKLFIERLGHGVAPAG-LLSPAAAEVII 66
           +R VR L+ ALG  +   LD+  VVE+MLNPDG L+++RL  G+A  G  L+    E II
Sbjct: 12  TRGVRMLRTALGPVISHLLDNPAVVEVMLNPDGHLWVDRLSEGLASTGERLAAGDGERII 71

Query: 67  GSVAHALQSEADDEQPIISGELPIGGHRFEGLLPPVVSGPSFTIRRRASRLIPLDDYVKH 126
             VAH + +E     P IS ELP  G RFEGLLPPVV+ P+F IR+ A  +  LDDYV  
Sbjct: 72  RLVAHHIGAEVHAGAPRISAELPGTGERFEGLLPPVVAAPTFAIRKPAVAVFTLDDYVAA 131

Query: 127 KIMTAAQVSVLRSAIASRMNIVISGGTGSGKTTLANAVIAEIVANAPDDRIVILEDTAEI 186
            IM+A Q   LR  +ASR NI+++GGT SGKTTL NA++AE+   +  +R++++EDT E+
Sbjct: 132 GIMSAPQAEALRHGVASRANILVAGGTSSGKTTLTNALLAEVAKTS--ERVILIEDTREL 189

Query: 187 QCAAENAVALHTSDTI-DMARLLKSTMRLRPDRIIVGEVRDGAALTLLKAWNTGHPGGVT 245
           QCAA N VAL T D +  ++ L++S++RLRPDRI +GEVR   AL LLKAW TGHPGG+ 
Sbjct: 190 QCAAPNLVALRTKDGVASLSDLVRSSLRLRPDRIPIGEVRGAEALDLLKAWGTGHPGGIG 249

Query: 246 TIHSNTAMSALRRLEQLTAEVSQQPMQEVIGEAVDLIVSIERTGKGRRVREVIHVEG 302
           TIH+ +A+  LRRLEQL  E      + +I E +DLI  +   G  RR+ E+  V+G
Sbjct: 250 TIHAGSAIGTLRRLEQLIQEAVVTVPRALIAETIDLIAVLSGRGTARRLTELARVDG 306