Pairwise Alignments

Query, 323 a.a., conjugal transfer protein from Agrobacterium fabrum C58

Subject, 598 a.a., putative Type II secretion system protein from Pseudomonas putida KT2440

 Score = 70.1 bits (170), Expect = 1e-16
 Identities = 44/120 (36%), Positives = 68/120 (56%), Gaps = 4/120 (3%)

Query: 147 IVISGGTGSGKTTLANAVIAEIVANAPDDRIVILEDTAEIQCAAENAVALHTSDTIDMAR 206
           I+++G TGSGKTT   A+I+EI  N   D+I+ +ED  E Q      + ++    +  AR
Sbjct: 353 ILVTGPTGSGKTTTLYAMISEI--NHGVDKIITIEDPVEYQLPGVLQIPVNEKKGLTFAR 410

Query: 207 LLKSTMRLRPDRIIVGEVRD-GAALTLLKAWNTGHPGGVTTIHSNTAMSALRRLEQLTAE 265
            L+S +R  PD+I+VGE+RD   A   +++  TGH    TTIH+N     + R  Q+  +
Sbjct: 411 GLRSILRHDPDKILVGEIRDPDTAQIAVQSALTGHL-VFTTIHANNVFDVIGRFSQMQVD 469