Pairwise Alignments

Query, 284 a.a., conjugal transfer protein from Agrobacterium fabrum C58

Subject, 332 a.a., Conjugative transfer protein TrbG from Variovorax sp. SCN45

 Score =  129 bits (323), Expect = 1e-34
 Identities = 80/200 (40%), Positives = 107/200 (53%), Gaps = 3/200 (1%)

Query: 84  QVCDIELQGGEVVRDVLVGDTVRWKVEPATSGAAGGQAIHLIVKPSEPNLVTSMVVTTSR 143
           +V  + LQ GE +  V  GDTVRW V   +SG      ++++VKP    L T++V+TTSR
Sbjct: 126 RVTVVSLQPGEELVTVAAGDTVRWIVGDTSSGNGADLRVNVLVKPIRSGLKTNLVITTSR 185

Query: 144 RTYHIQLKSHANQYMARVGFEYPEDVSARLADINARMEANTIPGAGVPAEQLSFSYSVSG 203
           RTY ++L S    +MA V +EYP D    L        A     +G+  E L F Y++SG
Sbjct: 186 RTYLLELTSTDKTWMASVSWEYPRDRMLALQRQAQAASAAAPVDSGLSLESLRFRYAISG 245

Query: 204 S-AGWRPTRLYSDGEKTYIQFPRSISGQDAPVLFVVSG-GQNRIVNYRMKGDMMIVDYNV 261
           S   W+P R + DG K YIQFP  I+  D P LFV+   G  ++VNYR +    IVD   
Sbjct: 246 SNTPWKPLRAFDDGAKVYIQFPAGIAQGDLPPLFVIGAEGDGQLVNYRFRSPYYIVDRLF 305

Query: 262 DRAVLVSGVGWKQEKVTIRR 281
             A L  G G K + V I R
Sbjct: 306 GAAELRLG-GDKGDVVRIER 324