Pairwise Alignments

Query, 438 a.a., conjugal transfer protein from Agrobacterium fabrum C58

Subject, 423 a.a., Conjugative transfer protein TrbI from Variovorax sp. SCN45

 Score =  178 bits (452), Expect = 3e-49
 Identities = 139/416 (33%), Positives = 201/416 (48%), Gaps = 45/416 (10%)

Query: 22  RINRLPIIIVVV-LVVAFLGVIFYGLTSRGLYFRGDEGPDTSSGNPASTFADQIKRGVSD 80
           R+NR  + I+V  L VA LG   + L       R   G  T   N      D++ +  S+
Sbjct: 33  RLNRRTLAILVGGLSVAVLGATIWSLQPH----RRGAGEQTELYN-----VDRVSK--SE 81

Query: 81  GIIGEPQQVTTLQPTPVETQGEKRAVNPFTPQPGQREEARPEAQLESEQVWRARLQREQE 140
           G+ G P   + L P   E       + P  P PG    A  ++Q            +   
Sbjct: 82  GLDGLPADYSKLPPKVPE-------LGP--PLPGDLGPAIVKSQ------------QPVT 120

Query: 141 EQYLRERQRQRMARLQANDAAYDSPIAVDRGKFNEREANTNDTAAATTSGASTAMTPGAS 200
             Y         AR +  DAA  S +    G   +  A     AAA   G++ A   G  
Sbjct: 121 PTYAPPGHDPEDARRKEADAAAGSSVFFRSGNQGKAAAPGTAQAAAVAPGSALA---GFD 177

Query: 201 DLYAAALRAGLGGQNGDP----NGQKSKEDFFNADLKELGYLPNRVVPQQSLYELKRGSV 256
            L  AA  A    Q  DP    N Q  KE F      E     N  +P  S Y++  G+V
Sbjct: 178 PL--AAGPASTAAQPADPTAVQNRQDQKEAFLKGGSTETRNSGNLQMPV-SPYQVMAGTV 234

Query: 257 IPATLITGINSDLPGRITAQVSQNVYDSATGHLLLIPQGTKLFGRYDSKVSFGQSRVLVV 316
           I   L+TGI SDLPG +   V++ VYD+ATG  LLIPQG+++ G+Y+S+VS+GQSRV VV
Sbjct: 235 IAGALVTGIKSDLPGDVIVTVTEPVYDTATGKFLLIPQGSRILGKYNSQVSYGQSRVQVV 294

Query: 317 WTDIIFPNGSTLQIGGMAGTDAQGYSGSRDKVDRNWLQTFGSAILIAVIGTGIDMAVPES 376
           W  +I P+ S+L++  +AGTD  GY+G  D VD +W + F  A L  ++G G ++A PE+
Sbjct: 295 WNRVILPDTSSLKLDNLAGTDPAGYAGLEDGVDWHWDRVFAGAALTTLLGVGAELAAPEN 354

Query: 377 STLATQDTASDAARRNFAETFGRVADRTIQRNMDVQPTLEIRPGYKFNVLVDQDIV 432
                +     A R +  ++  +V    I+RNM++QPTL  RPG    ++V++D+V
Sbjct: 355 RQNGNRIVI--AGRDSAQDSINQVGQEMIRRNMNIQPTLTERPGLPVRIIVNRDLV 408