Pairwise Alignments

Query, 283 a.a., ABC transporter, substrate binding protein (nopaline) from Agrobacterium fabrum C58

Subject, 250 a.a., L-arginine ABC transporter - periplasmic binding subunit from Pseudomonas putida KT2440

 Score =  127 bits (319), Expect = 2e-34
 Identities = 79/269 (29%), Positives = 133/269 (49%), Gaps = 30/269 (11%)

Query: 9   LAAVVTGVLLAAGPTQAKDYKSITIATEGSYAPYNFKDAGGKLIGFDIDLGNDLCKRMNI 68
           LAA  T V+ A     A   + + +  E +Y P+N KDA G ++GFD D+G+ LC +M +
Sbjct: 9   LAAAATLVMSA----NAMAAEKLRMGIEAAYPPFNNKDASGNVVGFDKDIGDALCAKMKV 64

Query: 69  ECKFVEQAWDGIIPSLTAGRYDAIMAAMGIQPAREKVIAFSRPYLLTPMTFLTTADSPLL 128
           EC  V   WDGIIP+L A ++D +++++ I   R++ + F+ PY    + F         
Sbjct: 65  ECSVVTSDWDGIIPALNAKKFDFLVSSLSITDERKQAVDFTNPYYSNKLQF--------- 115

Query: 129 KTQVAIENLPLDNITPEQKAELDKFTKIFEGVKFGVQAGTSHEAFMKQMMPSVQISTYDT 188
              +A +N+           + DK  +  +G   G Q  T    +++   P V+I  YDT
Sbjct: 116 ---IAPKNVDF---------KTDK--ESLKGKVIGTQRATLAGTYLEDNYPDVEIKLYDT 161

Query: 189 IDNVVMDLKAGRIDASLASVSFLKPLTDKPDNKDLKMFGPRMTGGLFGKGVGVGIRKEDA 248
            +N  +DL +GRID  LA            D  + +  G  +   +    +G+ +RK D 
Sbjct: 162 QENAYLDLVSGRIDGILADKYVQYEWLKSKDGSNFEFKGEPV---MDSDKIGIAVRKGDT 218

Query: 249 DLKALFDKAIDAAIADGTVQKLSQQWFGY 277
            L+   +KA+    ADGT +K++ ++F +
Sbjct: 219 KLRDDLNKALAEIKADGTYKKINDKYFPF 247