Pairwise Alignments

Query, 241 a.a., ABC transporter, membrane spanning protein (nopaline) from Agrobacterium fabrum C58

Subject, 237 a.a., Histidine ABC transporter, permease protein HisM (TC 3.A.1.3.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  173 bits (439), Expect = 2e-48
 Identities = 96/215 (44%), Positives = 140/215 (65%), Gaps = 4/215 (1%)

Query: 19  TTLTLAFISLLIGFVVSVPVALMRLSKNRIVSSLAYGYVYIIRSTPLLVQMFLIYYGSAQ 78
           TT+ L   SL +G V+++  AL   S    +  +   Y Y+IR TPLL+Q++LIYYG AQ
Sbjct: 21  TTVWLLLSSLGVGAVLALLFALALTSSIAPLRWIVGAYTYVIRGTPLLIQLYLIYYGLAQ 80

Query: 79  FRGVLS---EVGLWSSFREPWFCAILALALNTAAYTSEIIRGGIQSVSLGQIEAARAVGM 135
              + +   +V  W+ F+EP+FCA+LA +LNTA YT+E++ G I+  + G+IEAA+A+GM
Sbjct: 81  LDWIQARWNDVWPWTHFKEPFFCALLAFSLNTAGYTAEMLAGAIRETAAGEIEAAQAMGM 140

Query: 136 STFLQFRRIVFPIAIRQALPAYGNEVMLIIKSTSLASTI-TIVEVTGLAKQIISATYSPV 194
           S  +  RRIV P A+R+ LPAY NEV++++ +TSLAST+  +++VT  A +I S  Y P 
Sbjct: 141 SPAMAMRRIVLPSAMRRTLPAYSNEVVMMLHATSLASTVPAMLDVTAAASRIYSDYYLPF 200

Query: 195 EVFIVAGAIYLFITFVVSRLVMLAEWWLNPHMRAR 229
           E +I A AIYL ITF +  +  LAE     H+  R
Sbjct: 201 EAYIFAAAIYLTITFSLVGMFKLAERRFLAHLAPR 235