Pairwise Alignments

Query, 241 a.a., ABC transporter, membrane spanning protein (nopaline) from Agrobacterium fabrum C58

Subject, 222 a.a., arginine ABC transporter permease from Escherichia coli BL21

 Score =  156 bits (394), Expect = 4e-43
 Identities = 83/214 (38%), Positives = 133/214 (62%), Gaps = 2/214 (0%)

Query: 6   IIESFPKLLAAVPTTLTLAFISLLIGFVVSVPVALMRLSKNRIVSSLAYGYVYIIRSTPL 65
           + E  P+L+  + T+LTL   SL++  ++++   ++   K  ++  L  GY+ +   TPL
Sbjct: 1   MFEYLPELMKGLHTSLTLTVASLIVALILALIFTIILTLKTPVLVWLVRGYITLFTGTPL 60

Query: 66  LVQMFLIYYGSAQFRGVLSEVGLWSSFREPWFCAILALALNTAAYTSEIIRGGIQSVSLG 125
           LVQ+FLIYYG  QF  +     LW    EPW CA++AL+LN+AAYT+++  G I+++  G
Sbjct: 61  LVQIFLIYYGPGQFPTLQEYPALWHLLSEPWLCALIALSLNSAAYTTQLFYGAIRAIPEG 120

Query: 126 QIEAARAVGMSTFLQFRRIVFPIAIRQALPAYGNEVMLIIKSTSLASTITIVEVTGLAKQ 185
           Q ++  A+GMS       I+ P A +++L +Y NEV+L+ KSTSLA TIT++EV G ++ 
Sbjct: 121 QWQSCSALGMSK-KDTLAILLPYAFKRSLSSYSNEVVLVFKSTSLAYTITLMEVMGYSQL 179

Query: 186 IISATYSPVEVFIVAGAIYLFITFVVSRLVMLAE 219
           +   TY  V VF  AG IYL +  +++ ++ L E
Sbjct: 180 LYGRTYD-VMVFGAAGIIYLVVNGLLTLMMRLIE 212