Pairwise Alignments

Query, 306 a.a., transcriptional regulator, LysR family from Agrobacterium fabrum C58

Subject, 303 a.a., LysR family transcriptional regulator YnfL from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  113 bits (282), Expect = 6e-30
 Identities = 84/277 (30%), Positives = 133/277 (48%), Gaps = 5/277 (1%)

Query: 5   IEIGSIRCFVVAAEELHFRRAAIRLNMSQPTLSQQIKRLEELMGVQLFIRSTRRVDLTRA 64
           +E+  +R FV  AEEL+F RAA RL ++QP LS QI+ LEE +GVQLF R  +RV LT++
Sbjct: 1   LELRHLRYFVAVAEELNFTRAAERLYIAQPPLSTQIRALEEELGVQLFERDKKRVYLTQS 60

Query: 65  GASFLDHARDILLKIDEAILNAKLEAGGLSPGGEELIIGAISPATSQLLPLILSRFRQRF 124
           G  FL+ AR IL  + +A   A   A G    G+  I    S   +Q LP  + R++   
Sbjct: 61  GRYFLERARGILASVQDAKDEAHRAATG--DVGKLSIGFTASSILTQALPQAIRRYQSIH 118

Query: 125 PRTRLAIKEVDSIELLRGIERGDFHVGLMRPPSNS--NLVRFRHLLSERFVAVMPRQSAL 182
           P   L + E+ S+  L  I      +G++R P+      V      S   VA MP+Q  L
Sbjct: 119 PSVELKMMELASMHQLDAIHHRSLDLGVLRKPNVGVPTGVVIEEWYSAPLVAAMPQQHVL 178

Query: 183 ARKPALRLSDFAGHGVFALKR-FELSCFETVYEQLSGAGLLIENDIAVSDTNTALALVTA 241
            +   + + +     +    R   +  +  V +  + AG          D +T + LV +
Sbjct: 179 TKGKGIHIGELKNVPLIVYPRDAGIGLYWKVMDLCAKAGFRPAVMHEARDASTMIGLVAS 238

Query: 242 GAGITFLPEWVSAMAPDGVVTRVVDDMSVEISMAVGW 278
           G G+  +P+    +  +GV+   + D     S+ +G+
Sbjct: 239 GLGVAIVPQGTQCVLLEGVLYSRILDKEAVSSLYLGY 275