Pairwise Alignments

Query, 306 a.a., transcriptional regulator, LysR family from Agrobacterium fabrum C58

Subject, 296 a.a., DNA-binding transcriptional regulator HcaR from Escherichia coli ECRC98

 Score =  117 bits (293), Expect = 3e-31
 Identities = 89/289 (30%), Positives = 134/289 (46%), Gaps = 7/289 (2%)

Query: 5   IEIGSIRCFVVAAEELHFRRAAIRLNMSQPTLSQQIKRLEELMGVQLFIRSTRRVDLTRA 64
           +E+  +R FV  A+ L+F RAA +L+ SQP+LS QI+ LE  +GV L +R  R+V LT A
Sbjct: 1   MELRHLRYFVAVAQALNFTRAAEKLHTSQPSLSSQIRDLENCVGVPLLVRDKRKVALTAA 60

Query: 65  GASFLDHARDILLKIDEAILNAKLEAGGLSPGGEELIIGAISPATSQLLPLILSRFRQRF 124
           G  FL  A  IL    E   NAKL A  +     +L IG +  A   LLP +L  FR R 
Sbjct: 61  GECFLQDALAIL----EQAENAKLRARKIVQEDRQLTIGFVPSAEVNLLPKVLPMFRLRQ 116

Query: 125 PRTRLAIKEVDSIELLRGIERGDFHVGLMRPPSNSNLVRFRHLLSERFVAVMPRQSALAR 184
           P T + +  + + +    I RG+  VGLMR P  S  + +  L  E  V V+P    LA 
Sbjct: 117 PDTLIELVSLITTQQEEKIRRGELDVGLMRHPVYSPEIDYLELFDEPLVVVLPVDHPLAH 176

Query: 185 KPALRLSDFAGHGVFALKRFELSCFETVYEQLSGAGLLIENDIAVSDTN--TALALVTAG 242
           +  +  +   G    +           + +          N + V+ TN    + LV  G
Sbjct: 177 EKEITAAQLDGVNFVSTDPAYSGSLAPIVKAWFAQENSQPNIVQVA-TNILVTMNLVGMG 235

Query: 243 AGITFLPEWVSAMAPDGVVTRVVDDMSVEISMAVGWNPDCPVPGILPFV 291
            G+T +P +++      VV R +      I++ + W      P +  F+
Sbjct: 236 LGVTLIPGYMNNFNTGQVVFRPIAGNVPSIALLMAWKKGEMKPALRDFI 284