Pairwise Alignments

Query, 215 a.a., AraC family transcriptional regulator from Agrobacterium fabrum C58

Subject, 277 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score =  143 bits (361), Expect = 3e-39
 Identities = 79/218 (36%), Positives = 116/218 (53%), Gaps = 11/218 (5%)

Query: 3   LRGGVTC--------RVPSGMWMVPPHCGVWVPGGMLHS-NVATANARLFFLFIEPGAAD 53
           LRG V C        R   G W++PPH   W+P G LH   ++ A +    L     AA 
Sbjct: 53  LRGQVFCVESGLVHVRTAHGSWLLPPHRAGWLPPGELHKVGISGATSGWTVLIAPAAAAQ 112

Query: 54  LPNRCCTLSLSPLVRELIIELADQS--EVATADSELMTTLLLSALSRMPVEHLHLPLTDE 111
           LP R C + +S L+R L+         +   A+ E M  +LL  + R P E LHLP+  +
Sbjct: 113 LPERPCVIGISELMRALVRRAVTWGGHDTLDAEQERMAAVLLDEMRRAPHEPLHLPMPTD 172

Query: 112 PRLARIASELADDPSDRSTMAQWARRVAMSENSLARLVQHQTGLTFGRWRQQLQLIIAIR 171
            RL RIA+ + + P +  T+ +WA    +S  +L+RL   +T ++F +WRQQ +L+ A+ 
Sbjct: 173 RRLLRIATAIYEQPENNRTLDEWAHWAGLSPRTLSRLFLAETAVSFAKWRQQARLVHALE 232

Query: 172 SLASGATVQQVSGDLGYESVSAFITMFKKALGTSPSRY 209
            LA G  V  ++  LGY + S FI MF++A G SP RY
Sbjct: 233 RLARGEAVADIADALGYATPSNFIAMFRRAFGESPGRY 270