Pairwise Alignments

Query, 649 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 695 a.a., putative efflux transporter from Pseudomonas putida KT2440

 Score =  218 bits (554), Expect = 9e-61
 Identities = 184/665 (27%), Positives = 293/665 (44%), Gaps = 44/665 (6%)

Query: 1   MLAYLIAISFDLDRPYWAVATVYIVAHPLSGAISSKSVFRLLGTLVGSFATLIMVPNLVN 60
           M+A  IA+   L RPYWA+ATVYIV+ P  G  SSK+++R +GTL+G+   + +VP LV 
Sbjct: 25  MIALYIALLMQLPRPYWAMATVYIVSSPFVGPTSSKALYRAVGTLLGAGGAIFLVPPLVQ 84

Query: 61  EPILLSGAIVLWVAACTFISLLDRTPRSYVSLLAGYTVLLAGLPLVSAPANTFDTVVSRV 120
            P+LLS A+ LW     F+SL  RT  +YV +LAGYT+ +  L +V  P   FD   SR 
Sbjct: 85  SPLLLSIAVALWTGTLLFLSLNLRTANNYVLMLAGYTLPMIALAVVDNPLAVFDVASSRA 144

Query: 121 EEIGLAIICASVVSHIVFPVHVGAVLISRIDGWMDRARTLLEATAAGKLSETQSRVERHA 180
           +EI L I+CA+VV  I +P  +  V++     W + A    +   A   S  +    R A
Sbjct: 145 QEICLGIVCAAVVGAIFWPRRLAPVVVGATGNWFNEAIRYSDTYLARDASADKVGGMRGA 204

Query: 181 LAADAADLRSFNLHLQYDGSRYRWAVSLVRSMQYRMAAFLPLLSEMEDLRRSLGKLNTSG 240
           +      L      L ++G+     +   R ++ RM   LP++  ++D   +L     + 
Sbjct: 205 MVTTFNSLELMIGQLAHEGAGPH-TLKNARELRGRMIHLLPVIDALDDALVALEGRAPAQ 263

Query: 241 ATQALAIITDAASHTRGSAE--------ILDSRIDALTSATTR-HTWEKLLLANAARTVR 291
             Q   ++  A    +G+A+         L  +I  L  AT       +LLL+NA   + 
Sbjct: 264 FAQLQPVLEAAREWLKGTADSASVAHWATLHEQIGRLQPATAALDQRAELLLSNALYRLT 323

Query: 292 NILRLADECRALLKSMEGENNARVVRVPHR-----RRAQHRDIGMALLSSLTVAVCLATS 346
               L  +C  L  ++   ++A+  R  +R     R     D G+ L S  +  + +  +
Sbjct: 324 EWADLWQDCCTLQHALR-TDDAKPWRAVYRHWRLGRLTAFFDRGLMLYSVASTVLAIVVA 382

Query: 347 IFFWIESGWADGMTFTQISGVLCCLLATMDDPVPAMRKFVGVTMCSVMAAFVYNFTIFPV 406
              WI  GW DG +   ++ V C   A MDDP P + +F   T+ SV+ + +Y F + P 
Sbjct: 383 CGLWIGLGWNDGASAVILAAVACSFFAAMDDPAPQIYRFFFWTLMSVIFSSLYLFLVLPN 442

Query: 407 IDGFVPLIAALGLFLVPAGICLAVPSLAIVGMGLCINFPLLLTLQAYPRADFVTFSNAAV 466
           +  F  L+ A  +  +  G     P   +  +   +N    +++Q    ADF TF N+ +
Sbjct: 443 LHDFPMLVLAFAVPFICIGTLTVQPRFYLGTLLTIVNTSTFISIQGAYDADFFTFLNSNL 502

Query: 467 A----TILAMVWTITVCGIFRSVRAETNARRFFSVTRKHVANIAAGKYSNAHVTYD-RMT 521
           A     + A +WT+    + R    E  A+R      + +  +        H     +M 
Sbjct: 503 AGPAGLLFAFIWTL----VMRPFGVELAAKRMTRFAWRDIVEMTEPATLAEHRQVGVQML 558

Query: 522 DIAGLFASRAAKVPTTSDIWDGDLLRDLRAGLHLTAMLERIETVSGGLQVLAKPIFPTIR 581
           D       R ++    S    G  LRDLR GL+L  +L  +       +     +   + 
Sbjct: 559 DRLMQHLPRLSQTGQDS----GVALRDLRVGLNLLDLLAYMPRAGQQARERLNTVVEEVG 614

Query: 582 TLYQQ-PRAGR-----GERLKNAVRA-----LDDLILSAEARTAVDIELLSHAVALRVCI 630
             Y    RAG         L+N  RA     LD+L    +ART     LL     LR+ +
Sbjct: 615 AHYAACLRAGERLHAPAALLRNMERARLALNLDELYERGDART----HLLHALSGLRLAL 670

Query: 631 APDAD 635
            P  +
Sbjct: 671 LPGVE 675