Pairwise Alignments

Query, 291 a.a., HlyD family secretion protein from Agrobacterium fabrum C58

Subject, 332 a.a., Tetrapartite efflux system, membrane fusion component FusE-like from Variovorax sp. SCN45

 Score =  233 bits (593), Expect = 6e-66
 Identities = 128/292 (43%), Positives = 180/292 (61%), Gaps = 13/292 (4%)

Query: 8   SGRVLLTLSMSSCAAVMGWHLWSFHIGTPWTRDAHVRADIVRLAPDISGPVTEVLVSDNA 67
           + R+L TL++ + +    W LW  +   PWTR+  VRAD+V++APD+SG V++V V DN 
Sbjct: 19  TARLLFTLTIVAASCWAAWQLWDHYELAPWTRNGRVRADVVQVAPDVSGLVSDVAVRDNQ 78

Query: 68  LVEKDAPLFRIEKDRFELALREAEAQVTGAKAGTDAAKV-------DFERYQRLASKEAA 120
            V   A LF +++ RFELA ++AEA V    A     ++       +  R   L    + 
Sbjct: 79  SVAAGALLFAVDRARFELAEQQAEAAVAAQAASVGNQRILIAQAHRENNRNSGLGDLVSQ 138

Query: 121 SVRERQH-----AETQMYQAEAAYQSALVARDLAKLNLERTTVRAPASGAITNFSLRKGN 175
            VRE+       A + +  AEAA + A VA D A+LNL RT VRAP +G +TN  LR+G 
Sbjct: 139 EVREQSRLRLDQANSALRSAEAALRQAQVALDTARLNLRRTEVRAPTAGLVTNLDLRQGA 198

Query: 176 YVLAGNAVGVLVEKESVYVAGYFEETKLPRIHIGDRVKIDIMGEPESAIGHVAGVAAGIE 235
           Y  AG+ V  LV+ +SVYV GYFEE KL RIH+GDRV++  M + ++  G V  +AAGI 
Sbjct: 199 YASAGHPVMALVDADSVYVEGYFEENKLARIHLGDRVRVTPM-DADAIEGAVESIAAGIA 257

Query: 236 DRERSDTAGSLASVAPTFSWVRLAQRIPVRIEIDHVPNNVRLIAGRTATIAI 287
           DR+RS  A  L SV PTF+WVRLAQR+PVR+++  +P   RL+ G+T T+ +
Sbjct: 258 DRDRSIGANLLPSVNPTFNWVRLAQRVPVRVKLGAIPAGTRLVTGQTVTVQV 309