Pairwise Alignments

Query, 291 a.a., HlyD family secretion protein from Agrobacterium fabrum C58

Subject, 289 a.a., putative membrane fusion efflux protein from Pseudomonas putida KT2440

 Score =  223 bits (567), Expect = 5e-63
 Identities = 121/282 (42%), Positives = 170/282 (60%), Gaps = 1/282 (0%)

Query: 10  RVLLTLSMSSCAAVMGWHLWSFHIGTPWTRDAHVRADIVRLAPDISGPVTEVLVSDNALV 69
           R+L+TL + + A + G+ LW +++ TPWTRDA VRAD+V +APD+SG V E+ V DN  V
Sbjct: 6   RILVTLCVVALAVLAGYQLWQYYMLTPWTRDARVRADVVVIAPDVSGWVRELKVHDNQQV 65

Query: 70  EKDAPLFRIEKDRFELALREAEAQVTGAKAGTDAAKVDFERYQRLASKEAASVRERQHAE 129
           +    L  I+++RF+ AL +A A VT  +A     +      +     EA S   R++A+
Sbjct: 66  KAGDLLMSIDRERFQAALDQASA-VTETRAQQLRLREREAARRTALGPEAISAELRENAQ 124

Query: 130 TQMYQAEAAYQSALVARDLAKLNLERTTVRAPASGAITNFSLRKGNYVLAGNAVGVLVEK 189
                A      A     +A++NL R+ VRAP SG ITN  L +GNYV  G +V  LV+ 
Sbjct: 125 INAAIARGELHEAEAQLQVARINLARSEVRAPRSGHITNLRLAEGNYVNTGESVMALVDD 184

Query: 190 ESVYVAGYFEETKLPRIHIGDRVKIDIMGEPESAIGHVAGVAAGIEDRERSDTAGSLASV 249
            + Y+  YFEETKLPRI +GD VK+ +MG  E   GHV  ++ GI DR  +  +  L  V
Sbjct: 185 STFYIQAYFEETKLPRIRVGDTVKVWLMGTGEPMQGHVESISRGITDRNSNPDSQLLPEV 244

Query: 250 APTFSWVRLAQRIPVRIEIDHVPNNVRLIAGRTATIAIEQSK 291
            PTF+WVRLAQRIPVRI +D VP  + L AG TA++ + + +
Sbjct: 245 EPTFNWVRLAQRIPVRIRLDQVPEGLTLSAGMTASVQVHEDR 286