Pairwise Alignments

Query, 249 a.a., ABC transporter nucleotide binding/ATPase from Agrobacterium fabrum C58

Subject, 255 a.a., ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  153 bits (386), Expect = 4e-42
 Identities = 92/244 (37%), Positives = 142/244 (58%), Gaps = 12/244 (4%)

Query: 11  LSVEFGGFKAVSNVSITVRDGELRVLLGANGAGKTTLMDLISGKTRSTQGKVFVYDTDIT 70
           L++ FGG  AV++VS     G L  ++G NGAGKTT  +LISG+ +++ G V +    ++
Sbjct: 7   LTIRFGGHVAVNSVSCAFAPGTLTAIVGPNGAGKTTYFNLISGQLKASAGTVSLDGQPLS 66

Query: 71  NWPEHNIARAGIGRKFQIPSIFRDLTVRQNL--------EVANCRNPSVFANLRFGFSPA 122
                    AG+GR FQ+ ++F +LTV +N+        E A+ R  ++++   +    A
Sbjct: 67  GLSPSARTHAGLGRAFQLTNLFPNLTVLENVRLAVQATREGAHRRGLNLWS--IWSDHKA 124

Query: 123 EANRVDEVLALTGLEAEKDVTAAYLSHGQTQWLELGMLIVQDPKVILLDEPTAGMTQAET 182
              R D++LA   L++ +  T A L HG  + LE+ +L+  +PKV + DEPTAGM  AE 
Sbjct: 125 LTERADQILAEVALKSREHATVASLPHGDQRKLEVALLMALEPKVFMFDEPTAGMNAAEA 184

Query: 183 RKTAQIIKNLK--GRHTILVVEHDMGFVREIAEYITVLHLGEVLAEGSVGDIEHNPKVRE 240
                +I+ LK     TIL+VEH M  VRE+A+ I VLH G ++A+G   ++  +P V+E
Sbjct: 185 PVILDLIRKLKQDKTKTILLVEHKMDVVRELADRIIVLHNGTLVADGEPAEVIASPVVQE 244

Query: 241 AYLG 244
           AYLG
Sbjct: 245 AYLG 248