Pairwise Alignments

Query, 249 a.a., ABC transporter nucleotide binding/ATPase from Agrobacterium fabrum C58

Subject, 291 a.a., High-affinity branched-chain amino acid transport ATP-binding protein BraF from Pseudomonas putida KT2440

 Score =  145 bits (365), Expect = 1e-39
 Identities = 98/283 (34%), Positives = 153/283 (54%), Gaps = 43/283 (15%)

Query: 4   IALTVDGLSVEFGGFKAVSNVSITVRDGELRVLLGANGAGKTTLMDLISGKTRSTQGKV- 62
           I L+VD L ++FGG KA+S+VS+ VR  ++  L+G NGAGKTT+ + ++G  +++ G++ 
Sbjct: 5   IILSVDNLMMQFGGIKALSDVSLKVRRNQIFALIGPNGAGKTTVFNCLTGFYKASGGRIE 64

Query: 63  ----------------------FVYDTDITN-------WPEHNIARAGIGRKFQIPSIFR 93
                                 FV      N          H + RAG+ R FQ   +F+
Sbjct: 65  LNVRGSHTNVIQLLGERFQAADFVSPARFANRMYYKMFGGTHLVNRAGLARTFQNIRLFK 124

Query: 94  DLTVRQNLEVANCRNPSVFANLRFG------FSPAEANRVDEV---LALTGLEAEKDVTA 144
           +++V +NL VA  ++  V  NL  G      +  AE++ +D     L +  L    +  A
Sbjct: 125 EMSVVENLLVA--QHMWVNRNLLAGVLNTKAYRKAESDALDHAFYWLEVVDLVDCANRLA 182

Query: 145 AYLSHGQTQWLELGMLIVQDPKVILLDEPTAGMTQAETRKTAQIIKNLKGRH--TILVVE 202
             LS+GQ + LE+   +   PK+I LDEP AG+   ET   +++I+ L+  H  T++++E
Sbjct: 183 GELSYGQQRRLEIARAMCTRPKIICLDEPAAGLNPQETEALSRMIRVLRDEHDITVVLIE 242

Query: 203 HDMGFVREIAEYITVLHLGEVLAEGSVGDIEHNPKVREAYLGS 245
           HDMG V  I+++I VL  G V+AEG+  DI HNP V  AYLG+
Sbjct: 243 HDMGMVMSISDHIVVLDHGNVIAEGAPQDIRHNPTVIAAYLGA 285