Pairwise Alignments

Query, 269 a.a., ABC transporter membrane spanning protein from Agrobacterium fabrum C58

Subject, 291 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

 Score =  105 bits (263), Expect = 8e-28
 Identities = 81/266 (30%), Positives = 124/266 (46%), Gaps = 16/266 (6%)

Query: 1   MGVINMAHGEMVMIGAYVAVLSGIWLKTSLLLAIPLAFVVTALLGLIIERVVVRRLYGRL 60
           M V+N AHG+++M G Y  V+       +   AI L   V AL+G+ +  V++RR+ G  
Sbjct: 34  MRVLNFAHGDLLMAGMYGIVILNHTFGINPYAAIILVAPVLALIGIAVYFVLIRRVLGA- 92

Query: 61  LDTLLATWGIAILLQQAVRLELGLTFLGIHIEGLGAGLQNVAVPSYLQGTFRFAGADINA 120
                       L+Q  V L L        +   GA L NV   S     FR AG  +  
Sbjct: 93  ----------GPLMQAQVTLGLSFAIQSTALLVFGADLLNVRT-SLDGAAFRIAGVVVGK 141

Query: 121 YRT--FIIAVTAALTLATWFILYRTTAGMQVRAIIRNPKMAAACGIDVKRINALTFAFGS 178
                F+I++     L TWFIL  T  G ++RA+ ++P MA  CGI V+ +  + F   +
Sbjct: 142 PELIGFLISIVVCAAL-TWFIL-STEFGRRLRAVAQDPTMAILCGIPVRSVQMIVFVGCT 199

Query: 179 GLAGVAGVMMSGFKTVFPDMGTTMVVDGFMVVVTGGVGSLFGTALSSGLLGEINALVAIG 238
            L  V    +  F  + P  G    +   MVVV GG+G L G  +   L+G + A+ +  
Sbjct: 200 ALLAVPAGCLMAFSQLTPTAGIQYSLLSLMVVVLGGLGDLRGAFVGGLLIGIVEAVTSAL 259

Query: 239 TNDILARAVVFGVVILVILVKPSGLF 264
            ++  A  +++ V  L +L +P GLF
Sbjct: 260 FSNPAAPGIIYLVFGLALLARPRGLF 285