Pairwise Alignments

Query, 269 a.a., ABC transporter membrane spanning protein from Agrobacterium fabrum C58

Subject, 290 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  133 bits (334), Expect = 5e-36
 Identities = 91/276 (32%), Positives = 141/276 (51%), Gaps = 24/276 (8%)

Query: 1   MGVINMAHGEMVMIGAYVAVLSGIWLKTSLLLAIPLAFVVTALLGLIIERVVVRRLYGRL 60
           M  IN+AHG   M G Y+ V +   L    L  +PLAF+V AL G ++ER + R +YG+ 
Sbjct: 29  MNFINLAHGAFAMAGGYLTVFAMQKLGLPFLACLPLAFIVVALAGALLERTLYRPMYGKP 88

Query: 61  -LDTLLATWGIAILLQQAVRLELGLTFLGIHIEGLGAGLQNVAVPSYLQGTFRFAGA--- 116
            LD +L + G+A +   A+   +G            +  QNV +P +L+G          
Sbjct: 89  HLDQVLFSIGLAFMAVAAIDYFVG------------SSQQNVQLPEWLRGRTEIGDGAFM 136

Query: 117 -DINAYRTFIIAVTAALTLATWFILYRTTAGMQVRAIIRNPKMAAACGIDVKRINALTFA 175
             +  YR FII V A LT+    IL +T  G ++RA + +P++AA  GI+V  +  LTFA
Sbjct: 137 LGMGHYRLFIIGVCAVLTVVLQLILSKTRFGSRLRAAVDDPRVAAGLGINVNIVFLLTFA 196

Query: 176 FGSGLAGVAGVMMSGFKTVFPDMGTTMVVDGFMVVVTGGVGSLFGTALSSGLLGEINALV 235
            GSGLAG+ G + +    + P      ++   +VV  GG  S+ G   ++ LLG    + 
Sbjct: 197 VGSGLAGLGGALGAEILGLDPTFPLKYMIYFLIVVSVGGTSSITGPLAAALLLG----IA 252

Query: 236 AIGTNDILARAVVFGVVILVILV---KPSGLFSFKG 268
            +     + +   F V +L+IL+   +P GLF+ KG
Sbjct: 253 DVAGKYFIPKMGAFTVYLLMILILMWRPQGLFTRKG 288