Pairwise Alignments

Query, 416 a.a., ABC transporter substrate binding protein from Agrobacterium fabrum C58

Subject, 421 a.a., branched-chain amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  273 bits (697), Expect = 9e-78
 Identities = 154/405 (38%), Positives = 231/405 (57%), Gaps = 15/405 (3%)

Query: 5   RREFLKTAATASAALALPALGGRAFAADAIKVGALYSQTGGLSVAEKLLANGVMMAVAEI 64
           RR  +K A T +A++A   +   A AA+ IKVG L+S +G ++++E  L +  +M + EI
Sbjct: 3   RRSLIK-AFTLTASIAAMGMTWTAQAAETIKVGILHSLSGTMAISETSLKDMALMTIDEI 61

Query: 65  NAAGGVLGRQVEVVVEDGASDPKTFSEKASKLILKDKISTVFGCHTSASRKAVLPIFERR 124
           NA GGV G+ +E VV D AS+   F+EK  +L+ +DK++ VFGC TS SRK+VLP+FE  
Sbjct: 62  NAKGGVNGKMLEAVVVDPASNWPLFAEKGRQLLTQDKVAVVFGCWTSVSRKSVLPVFEEL 121

Query: 125 GAMLFYQTHYEGFECSRNVVYSGAVPNQQLSNYIPWIVEKLG--KKKFFIVGSNYVYPRE 182
             +LFY   YEG E S NV Y+GA PNQQ    + +++ + G   K+FF++G++YVYPR 
Sbjct: 122 NGLLFYPVQYEGEEMSPNVFYTGAAPNQQAIPAVEYLMSEEGGSAKRFFLLGTDYVYPRT 181

Query: 183 MAKVSKKLIEAAGA--EWVADEYLELGHSEWAVMVSKIKE---SGADVVLSNVVGDSIIA 237
             K+ +  + A G   + + + Y   GH+++  +V+ IK+    G   V+S V GDS + 
Sbjct: 182 TNKILRAFLHAKGVADKDIEEVYTPFGHADYQTIVANIKKFSAGGKTAVISTVNGDSNVP 241

Query: 238 FYREFKNQGLSQEDIPICATVTSEIEIAAMGAEYAAGSYTSFPYFMSIETPENKSFIERF 297
           FY+E  NQGL   D+P+ A    E E+  +  +   G+  ++ YF S+E P N  F+  +
Sbjct: 242 FYKELANQGLKATDVPVVAFSVGEEELRGIDTKPLVGNLAAWNYFQSVENPVNTKFVADW 301

Query: 298 RTFVND------PKAVTYHSLEAAYFQVFLWKQAVEKSGDLSADAIRAGIRGQTYDAPGG 351
           + +          KAVT   +EA Y  + +W QA EK+     D +R  + GQT+ AP G
Sbjct: 302 KAYAKKHNLPGADKAVTNDPMEATYVGIHMWAQAAEKAKSTDVDKVREALAGQTFAAPSG 361

Query: 352 -KVTTDPDNLHCWLTPRIGQWQPDGQSKVVNAYPAPIKPLPYSAY 395
             +T D  N H      IG+ Q DGQ  VV     PI+  P+S Y
Sbjct: 362 FTLTMDKTNHHLHKPVMIGEIQADGQFSVVWQTQEPIRAQPWSPY 406