Pairwise Alignments

Query, 416 a.a., ABC transporter substrate binding protein from Agrobacterium fabrum C58

Subject, 378 a.a., branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein (braC-like) from Pseudomonas putida KT2440

 Score = 99.4 bits (246), Expect = 2e-25
 Identities = 88/345 (25%), Positives = 160/345 (46%), Gaps = 14/345 (4%)

Query: 23  ALGGRAFAADAIKVGALYSQTGGLSVAEKLLANGVMMAVAEINAAGGVLGRQVEVVVEDG 82
           ALG  ++    +K+G     TG  +   +    G   A  +INAAGGV G ++ +V  D 
Sbjct: 18  ALGVSSYVQADVKIGVAGPMTGANAAFGEQYMKGAQAAADKINAAGGVNGEKIVLVKGDD 77

Query: 83  ASDPKTFSEKASKLILKDKISTVFGCHTSASRKAVLPIFERRGAMLFY--QTHYEGFECS 140
           A +PK     A++L+ +DK+  V G   S++      +++  G +      T+ +  E  
Sbjct: 78  ACEPKQAVAVANRLVDQDKVIGVVGHFCSSNTIPASEVYDEAGVIAITPGSTNPQVTERG 137

Query: 141 RNVVYSGAVPNQQLSNYI-PWIVEKLGKKKFFIVGSNYVYPREMAKVSKKLIEAAGAEWV 199
            + ++     + Q       +IV+ L  KK  ++     Y + +A  +K  +E  G + V
Sbjct: 138 LSAMFRMCGRDDQQGIVAGDYIVDVLKGKKVAVLHDKDTYGQGLADATKAQLEKRGVKPV 197

Query: 200 ADEYLELGHSEWAVMVSKIKESGADVVLSNVVGDSIIAFYREFKNQGLSQEDIPICA--- 256
             E L  G  +++ +V+KI+ +GADVV    +        R+ + QGL  +D+   +   
Sbjct: 198 LYEGLTRGEKDFSAVVTKIRSTGADVVYFGGLHPEAGPLVRQLREQGL--KDVKFMSDDG 255

Query: 257 TVTSEIEIAAMGAEYAAGSYTSFPYFMSIETPENKSFIERFRTFVNDPKAVT---YHSLE 313
            VT E+   A GA+Y  G Y +F     +  P++K+ +E FR    +P+  T   Y SL+
Sbjct: 256 IVTDELVSTAGGAQYVDGVYMTFGADPRL-LPDSKAVVEEFRKAGTEPEGYTLYAYASLQ 314

Query: 314 --AAYFQVFLWKQAVEKSGDLSADAIRAGIRGQTYDAPGGKVTTD 356
             AA F      +  + +  L A+ ++  +  + +D+ G    +D
Sbjct: 315 ALAAAFNGAKSNKGEDAAKWLKANPVQTVMGEKKWDSKGDLTVSD 359