Pairwise Alignments

Query, 416 a.a., ABC transporter substrate binding protein from Agrobacterium fabrum C58

Subject, 371 a.a., branched-chain amino acids ABC transporter - periplasmic leucine binding subunit from Pseudomonas putida KT2440

 Score = 92.4 bits (228), Expect = 2e-23
 Identities = 81/346 (23%), Positives = 144/346 (41%), Gaps = 16/346 (4%)

Query: 17  AALALPALGGRAFAADAIKVGALYSQTGGLSVAEKLLANGVMMAVAEINAAGGVLGRQVE 76
           AA+ L  +   +FAAD IK+G    +TG ++    +   G   A+ +INAAGGV G+ +E
Sbjct: 9   AAMVLAGVASHSFAADTIKIGIAGPKTGPVTQYGDMQFIGAKQAIKDINAAGGVDGKMLE 68

Query: 77  VVVEDGASDPKTFSEKASKLILKDKISTVFGCHTSASRKAVLPIFERRGAMLFY------ 130
               D A DPK     A+K ++ D +  V G   S+S +    I+E  G ++        
Sbjct: 69  AKEYDDACDPKQAVAVANK-VVNDGVKFVVGHLCSSSTQPASDIYEDEGVIMITPAATSP 127

Query: 131 QTHYEGFECSRNVVYSGAVPNQQLSNYIPWIVEKLGKKKFFIVGSNYVYPREMAKVSKKL 190
           +    G++     +   +       NY   I + +  K   ++     Y   +A   K+ 
Sbjct: 128 EITARGYKLIFRTIGLDSAQGPAAGNY---IADHVKPKVVAVLHDKQQYGEGIATAVKQT 184

Query: 191 IEAAGAEWVADEYLELGHSEWAVMVSKIKESGADVVLSNVVGDSIIAFYREFKNQGLSQE 250
           +E+ G +    E L  G  +++ ++ K+K++  D V        +    R+ + +GL  +
Sbjct: 185 LESKGTKVAVFEGLNAGDKDFSSIIQKLKQNNVDFVYYGGYHPELGLILRQAQEKGLKAK 244

Query: 251 DIPICATVTSEIEIAAMGAEYAAGSYTSFPYFMSIETPENKSFIERFRTFVNDPKAVTYH 310
            +         I   A  A  + G   + P     + P NK  ++  +    DP      
Sbjct: 245 FMGPEGVGNDSISQIAQNA--SEGLLVTLPKSFDAD-PANKKIVDAIKADGKDPSG---P 298

Query: 311 SLEAAYFQVFLWKQAVEKSGDLSADAIRAGIRGQTYDAPGGKVTTD 356
            +  AY  V L  Q ++K+G    D +   I   T+  P G ++ D
Sbjct: 299 FVFPAYSAVELIAQGIKKAGSDDTDKVAEAIHKGTFKTPTGDLSFD 344