Pairwise Alignments

Query, 298 a.a., ABC transporter membrane spanning protein (branched chain amino acid) from Agrobacterium fabrum C58

Subject, 289 a.a., Branched-chain amino acid ABC transporter, permease protein LivH (TC 3.A.1.4.1) from Variovorax sp. SCN45

 Score =  112 bits (281), Expect = 8e-30
 Identities = 72/254 (28%), Positives = 128/254 (50%), Gaps = 5/254 (1%)

Query: 9   FIEVLIGGLLSGVMYSLVAIGFVLIYKTSGVLNFSQGALLLFAALTFVSLVERGVPFAPA 68
           ++  +I GL  G +Y+L  +G V++Y++SGVLNF+ GA+    A    S++E   P A A
Sbjct: 4   YLPFVISGLGLGAVYALSGVGLVVLYRSSGVLNFAFGAIGAIGAYVAWSMLEADWPQALA 63

Query: 69  FAITFAIMVVIGIAIERVVLRPLTNKPPITLFMATLGLSYIIEGAAQLLWGTQVHGL--- 125
           ++      +++ +A  R++   L+++ P    +ATLG + ++ G  +  WG Q   L   
Sbjct: 64  WSAAIVTSMLLSLAYGRLLAPRLSHRDPTIRSIATLGFALVVVGFTEWYWGEQPRRLVLP 123

Query: 126 -DLGIEDIPFDVGGVFISQFDIFAALVAAGMVAALSAFFRYTRIGLGFRAVADDQFAALA 184
            D G  D       V ++        +A  M+  +      TR+GL  RA+A+D+  +  
Sbjct: 124 TDAGAIDFVLGEVEVRLTHTRALGLTLAVLMMGGVGLLLSKTRVGLKMRALANDRDLSAL 183

Query: 185 VGLRLPWIWASVWAAAGLVALVAGLLWGARVGVQFS-LSLVVLKALPVLVLGGFDSILGA 243
           +G+R+  +    W  +G  A V GLL    V +Q + L+ +V+ A    ++G   S+   
Sbjct: 184 LGIRVLGVDTVAWVLSGAFAGVCGLLLANIVRLQATLLTFLVIPAFAAAIIGRLHSLPAT 243

Query: 244 IIGGLLVGASEKLA 257
           + GG+ +G  E LA
Sbjct: 244 VAGGIAIGVLEALA 257