Pairwise Alignments

Query, 298 a.a., ABC transporter membrane spanning protein (branched chain amino acid) from Agrobacterium fabrum C58

Subject, 304 a.a., High-affinity branched-chain amino acid transport system permease protein BraD from Pseudomonas putida KT2440

 Score =  125 bits (314), Expect = 1e-33
 Identities = 87/307 (28%), Positives = 154/307 (50%), Gaps = 24/307 (7%)

Query: 9   FIEVLIGGLLSGVMYSLVAIGFVLIYKTSGVLNFSQGALLL----FAALTFVSLVERGVP 64
           F++ L+ GL  G +Y L+AIG+ ++Y   G++NF+ G + +     AA++   L   GV 
Sbjct: 5   FLQQLVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFGVE 64

Query: 65  FAPAFAI-----TFAIMVVIGIAIERVVLRPLTNKPPITLFMATLGLSYIIEGAAQLLWG 119
             P   +     T  +  V G  IER+  +PL N   +   ++ +G+S I++  AQ+  G
Sbjct: 65  SFPLLMLGTLLFTIVVTGVYGFTIERIAYKPLRNSTRLAPLISAIGISLILQNYAQISQG 124

Query: 120 TQVHGLDLGIED-IPFDVGGVFISQ-----FDIFAALVAAGMVAALSAFFRYTRIGLGFR 173
            +  G+   +E  +  +VG  F+       F + AA V  G+   L+   +YT++G   R
Sbjct: 125 ARQQGVPTLLEGAMRVEVGSGFVQLTYTKIFILVAAFVGMGL---LTYVIKYTKLGRMCR 181

Query: 174 AVADDQFAALAVGLRLPWIWASVWAAAGLVALVAGLLWGARVGV-QFSLSLVV-LKALPV 231
           A   D+  A  +G+    + + V+    ++A +AG+L     G   F    ++ +KA   
Sbjct: 182 ATQQDRKMASILGINTDRVISYVFVIGAVMAALAGVLITMNYGTFDFYAGFIIGIKAFTA 241

Query: 232 LVLGGFDSILGAIIGGLLVGASEKLAEVYIGEYFGGGIEGWFAYVVALAFLLIRPSGLFG 291
            VLGG  S+ GA++GG+++G SE L    I   +    +  F++ + +  L+ RP GL G
Sbjct: 242 AVLGGIGSLPGAMLGGIILGISESLFSGLINSDY----KDVFSFSLLVMILIFRPQGLLG 297

Query: 292 QKFVERV 298
           +  V +V
Sbjct: 298 RPLVAKV 304