Pairwise Alignments

Query, 298 a.a., ABC transporter membrane spanning protein (branched chain amino acid) from Agrobacterium fabrum C58

Subject, 304 a.a., branched-chain amino acid ABC transporter permease from Magnetospirillum magneticum AMB-1

 Score =  109 bits (273), Expect = 7e-29
 Identities = 86/312 (27%), Positives = 149/312 (47%), Gaps = 31/312 (9%)

Query: 8   FFIEVLIGGLLSGVMYSLVAIGFVLIYKTSGVLNFSQGALLLFAA----LTFV---SLVE 60
           +F++ LI GL  G +Y LVA+G+ ++Y   G++NF+ G + +  A    +TF+   +++ 
Sbjct: 3   YFLQQLINGLTLGAIYGLVALGYTMVYGVLGMINFAHGTIYMVGAFISLITFLVATTVLG 62

Query: 61  RGVPFAPAFAI--TFAIMVVIGIAIERVVLRPLTNKPPITLFMATLGLSYIIEGAAQLLW 118
             VP A    +    A+  + G   ERV  RPL + P +   ++ +G+S +++       
Sbjct: 63  TSVPLALVLTLVAAMALTALWGWTAERVAYRPLRSAPRLAPLISAIGVSIMLQNFVAQAQ 122

Query: 119 GTQVHGLDLGIEDIPFDVGGVFISQFDIFAA------LVAAGMVAALSAFFRY----TRI 168
           G +   L       P   GG+ +     F        +V   +  AL A F +    T +
Sbjct: 123 GARAKPLP------PVFRGGITLMDSGDFVVSLSWMQMVIMALTLALMAVFTWVITRTAL 176

Query: 169 GLGFRAVADDQFAALAVGLRLPWIWASVWAAAGLVALVAGLLWGARVGV-QFSLS-LVVL 226
           G   RA   D   A  +G+ +  + ++ +     +A VAG++     GV  F +  L  +
Sbjct: 177 GRAQRACEQDMKMASLLGIDVDRVISTTFVIGAGLAGVAGMMVTLYYGVIDFYIGFLAGI 236

Query: 227 KALPVLVLGGFDSILGAIIGGLLVGASEKLAEVYIGEYFGGGIEGWFAYVVALAFLLIRP 286
           KA    VLGG  S+ GA++GGLL+G    L E +   YF    +    + + +A L+ RP
Sbjct: 237 KAFTAAVLGGIGSLPGAMLGGLLIG----LIEAFWSAYFSIEYKDVATFSILVAVLVFRP 292

Query: 287 SGLFGQKFVERV 298
           +GL G+  VE++
Sbjct: 293 TGLLGRPDVEKI 304