Pairwise Alignments

Query, 364 a.a., ABC transporter membrane spanning protein (branched chain amino acid) from Agrobacterium fabrum C58

Subject, 318 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  147 bits (371), Expect = 4e-40
 Identities = 106/327 (32%), Positives = 158/327 (48%), Gaps = 22/327 (6%)

Query: 14  LPRRAGTVVVLAIAYLVVPFVGTSYLFEAILLPFLALSLAGVGLNLLTGYAGQVSLGSAA 73
           L  +  T++VLA+  +  PF   S  +  +       ++A VG+ +LTGYAGQ+SLG A 
Sbjct: 3   LSPKQSTLLVLAVLMIASPFFFPSNYYYRVGSLVFVNAIAVVGIVILTGYAGQISLGHAG 62

Query: 74  FMAVGAFAAYNFDLRVDGLPLTVSIVLAGLSAAIIGIVFGLPSLRLRGFYLAVSTLAAQF 133
           F+ +G +A         GLP  +++V     +  I  V G P L+L+G+YLAV+TL    
Sbjct: 63  FLGIGGYACALLPAHF-GLPPALAVVAGAALSGAIAYVVGRPILKLKGYYLAVATLGFGV 121

Query: 134 FVQWALTKFSWLSNESASGVIDAPA----LSLAGISFEGPVGRYLFALTTVTALTFLAYR 189
            V   L    WL+       +  P     L   GI    P   Y F    +    +LA  
Sbjct: 122 LVSMVLANEGWLTGGPDGIKVPDPGIRALLEQVGIELTNPQFWYAFCGLVLFIGAWLALN 181

Query: 190 LVSSQTGRNFIAVRDNETAARIIGVPVLRTKLLAFAISSFIIGVAGVIWAFA-YLRTVEP 248
           L  S TGR   A+  +E AAR  G+ V + KL AF IS+    VAG + A    L T + 
Sbjct: 182 LRESPTGRALRALHGSEVAARTAGIDVAKAKLNAFVISAVYASVAGSLLALQNRLITPDV 241

Query: 249 AGFNLDRSFQILFIVIIGGLASIRGAFFGAALIVVFPLVLSRLGSLLLGDVFDSGVLDMT 308
           AGF    S +++ + ++GG  S+ G  FGAAL+ + P VL+              VL   
Sbjct: 242 AGFM--HSIELVTMAVLGGAGSVLGGIFGAALLTLLPQVLT--------------VLQDY 285

Query: 309 QRIVIGALIILFLILEPDGLVSLWDRL 335
           + +V+G +++L +I  P GL+    RL
Sbjct: 286 EHVVLGLVMMLVMIFLPAGLIPSARRL 312