Pairwise Alignments

Query, 364 a.a., ABC transporter membrane spanning protein (branched chain amino acid) from Agrobacterium fabrum C58

Subject, 335 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  117 bits (294), Expect = 3e-31
 Identities = 101/327 (30%), Positives = 155/327 (47%), Gaps = 28/327 (8%)

Query: 11  PCSLPRRAGTV----VVLAIAYL-VVPFVGTSYLFEAILLPFLALSLAGVGLNLLTGYAG 65
           P +LP+    +    V L IA L V+PFV  S   +A+ +  L   L  VG NLL GY G
Sbjct: 14  PRALPKAGAALDRWRVPLTIAVLAVLPFVLPS---QALAVNVLIYGLFTVGFNLLFGYTG 70

Query: 66  QVSLGSAAFMAVGAFAAYNFDLRVDGLPLTVSIVLAGLSAAIIGIVFGLPSLRLRGFYLA 125
            +S G AAF   GA+      +   G     +++   + A+++  V G  S+R RG Y  
Sbjct: 71  LLSFGHAAFFGTGAYLT-GMAIAHLGFGWFPAMLTGIVGASLLSAVIGALSIRTRGIYFC 129

Query: 126 VSTLA-AQFFVQWALTKFSWLSNESA-SGVIDAPALSLAGISFE--GPVGRYLFALTTVT 181
           + TLA AQ     AL    W   E+   G   A A  + G S     P+ +Y F +    
Sbjct: 130 MVTLALAQLVYYVALQASGWTGGENGLRGFTVAKADLIGGFSVNLLNPLAKYYFIMFFAA 189

Query: 182 ALTFLAYRLVSSQTGRNFIAVRDNETAARIIGVPVLRTKLLAFAISSFIIGVAGVIWAFA 241
              +   R+++S  G    AVR+NET AR  G  V RTKLL+F +S  + G+AG + A  
Sbjct: 190 LALWFVSRVLNSPFGAAIEAVRENETRARACGFDVERTKLLSFILSGALCGLAGTLSAL- 248

Query: 242 YLRTVEPAGFNLDRSFQILFIVIIGGLASIRGAFFGAALIVVFPLVLSRLGSLLLGDVFD 301
           +L  V     ++  S  ++ + ++GG  S  G F GA +             LL+ DV  
Sbjct: 249 HLSIVPLDALSVHTSSIVVMMTMLGGAGSFFGPFVGALVF------------LLIEDV-- 294

Query: 302 SGVLDMTQRIVIGALIILFLILEPDGL 328
           + +     ++++G + ILF++  P G+
Sbjct: 295 ASLWTTHWQLIVGIVFILFVLFLPKGI 321