Pairwise Alignments

Query, 364 a.a., ABC transporter membrane spanning protein (branched chain amino acid) from Agrobacterium fabrum C58

Subject, 435 a.a., High-affinity branched-chain amino acid transport system permease protein BraE from Pseudomonas putida KT2440

 Score =  124 bits (311), Expect = 5e-33
 Identities = 94/333 (28%), Positives = 153/333 (45%), Gaps = 41/333 (12%)

Query: 21  VVVLAIAYLVVPFVGTSYLFEAILLPFLALSLAGVGLNLLTGYAGQVSLGSAAFMAVGAF 80
           +  L +  +V P     YL   ++L  + + L G+GLN++ G AG + LG  AF A+GA+
Sbjct: 109 IPALIVIAIVFPIFANKYLLTVVILGLIYV-LLGLGLNIVVGLAGLLDLGYVAFYAIGAY 167

Query: 81  AAYNFDLRVDGLPLTVSIVLAGLSAAIIGIVFGLPSLRLRGFYLAVSTLAAQFFVQWALT 140
                  +  GL     + LA ++AA+ G + G P LR+ G YLA+ TL     ++  L 
Sbjct: 168 -GLALGYQYLGLGFWSVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLN 226

Query: 141 KFSWLSNESASGVIDAPALSLAGISF-----EGPVG-----------------RYLFALT 178
             +WLS       + AP+ +  G+ F     +G V                   Y     
Sbjct: 227 --NWLSFTGGPNGMPAPSPTFFGLEFGRRAKDGGVPIHEFFGFEYNASLKFVFIYAVLFM 284

Query: 179 TVTALTFLAYRLVSSQTGRNFIAVRDNETAARIIGVPVLRTKLLAFAISSFIIGVAGVIW 238
            V A+ ++ +RL     GR + A+R++E A R +G+  +  KL AF + +   G+AGV +
Sbjct: 285 VVLAVLYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTLGASTAGLAGVFF 344

Query: 239 AFAYLRTVEPAGFNLDRSFQILFIVIIGGLASIRGAFFGAALIVVFPLVLSRLGSLLLGD 298
           A  Y   V P+ F    S  IL IV++GG+ S  G    A ++ V P +L       +  
Sbjct: 345 A-TYQGFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEYRV-- 401

Query: 299 VFDSGVLDMTQRIVIGALIILFLILEPDGLVSL 331
                       ++ G L++L +I  P GL+ +
Sbjct: 402 ------------LLFGVLMVLMMIWRPRGLIRI 422