Pairwise Alignments

Query, 364 a.a., ABC transporter membrane spanning protein (branched chain amino acid) from Agrobacterium fabrum C58

Subject, 354 a.a., putative Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  349 bits (895), Expect = e-101
 Identities = 178/332 (53%), Positives = 234/332 (70%), Gaps = 3/332 (0%)

Query: 11  PCSLPRR---AGTVVVLAIAYLVVPFVGTSYLFEAILLPFLALSLAGVGLNLLTGYAGQV 67
           P +L RR    G  ++L +A++ +P++G  Y   AIL+PFL LSLAG+GLN+LTGY GQ 
Sbjct: 16  PLTLVRRRWPVGLPLLLLVAFVGLPWLGNDYWLNAILIPFLVLSLAGLGLNVLTGYTGQT 75

Query: 68  SLGSAAFMAVGAFAAYNFDLRVDGLPLTVSIVLAGLSAAIIGIVFGLPSLRLRGFYLAVS 127
           S+G+A FMAVGAFA Y   LRV GLPL ++++  GL A ++G++FG+PS R++GFYL V+
Sbjct: 76  SVGAAGFMAVGAFATYGLLLRVPGLPLPLALIGGGLIAGLVGLLFGIPSSRIKGFYLMVT 135

Query: 128 TLAAQFFVQWALTKFSWLSNESASGVIDAPALSLAGISFEGPVGRYLFALTTVTALTFLA 187
           TLAAQFF++W   KF W  N ++SG I AP L L   S   PVGRYL  L+ V  LT++A
Sbjct: 136 TLAAQFFLEWVFAKFPWFYNHASSGTISAPRLELFSHSLASPVGRYLLTLSCVVLLTWVA 195

Query: 188 YRLVSSQTGRNFIAVRDNETAARIIGVPVLRTKLLAFAISSFIIGVAGVIWAFAYLRTVE 247
             LV SQ GRN++A+RD +TAA +IG+PV R K LAFA+SSF +G+AG +WAFAYL T  
Sbjct: 196 VNLVRSQVGRNWMAIRDMDTAASVIGIPVERYKRLAFAVSSFYLGIAGALWAFAYLGTSS 255

Query: 248 PAGFNLDRSFQILFIVIIGGLASIRGAFFGAALIVVFPLVLSRLGSLLLGDVFDSGVLDM 307
              F+++RSFQILFI+IIGG+ SI G F GAA I + P++LS  G  L G   D+G L  
Sbjct: 256 AGSFDINRSFQILFIIIIGGMGSIAGNFIGAAFISLTPILLSHAGQWLFGGNVDAGQLQN 315

Query: 308 TQRIVIGALIILFLILEPDGLVSLWDRLKSRI 339
            Q+I+ G LII FLI EP+GLV L   L+ RI
Sbjct: 316 LQKILFGCLIIWFLIKEPEGLVRLLGDLRERI 347