Pairwise Alignments

Query, 502 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 456 a.a., DNA repair enzyme from Pseudomonas putida KT2440

 Score = 47.0 bits (110), Expect = 1e-09
 Identities = 52/199 (26%), Positives = 88/199 (44%), Gaps = 23/199 (11%)

Query: 256 SEFDDLLGGGVARGSSTLLIGPAGTGKSLFALQFVEAAVSRGERAAIFVFDEELGLLFDR 315
           +E D +LGGG+  GS  L+ G  G GKS   LQ +   ++ G  A     +E    +  R
Sbjct: 79  TELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTL-CNIAVGMPALYVTGEESQQQVAMR 137

Query: 316 TKEMGLDLEAMRDKNLLHIEQLDAAELSPGEFSQRVRDKVASFDAKTVV----IDSINGY 371
           ++ +GL  + ++      IE + A        ++  + +V   D+   +    + S  G 
Sbjct: 138 SRRLGLPQDQLKVMTETCIETIIAT-------ARVEKPRVMVIDSIQTIFTEQLQSAPGG 190

Query: 372 QAAMPEENALILHMHELLQYLNRQGANTFITVAQHGLVGDMKSPVDVTYLADTVILLRYF 431
            A + E  AL      L++Y  + G   F+ V      G +  P  + ++ DTV+   YF
Sbjct: 191 VAQVRESTAL------LVRYAKQSGTAIFL-VGHVTKEGSLAGPRVLEHMVDTVL---YF 240

Query: 432 EAEARVR-RAISVIKKRTG 449
           E E+  R R +  +K R G
Sbjct: 241 EGESDGRLRLLRAVKNRFG 259



 Score = 42.4 bits (98), Expect = 4e-08
 Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%)

Query: 6   VAKAKTGVEGLDDILSGGLSRRHVFLLEGAPGSGKTTIALQFLLEGATIGERCLYITLSE 65
           + +  T    LD +L GGL    V L+ G PG GK+TI LQ L   A +G   LY+T  E
Sbjct: 71  IPRFTTSSTELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCNIA-VGMPALYVTGEE 129

Query: 66  TEEEL 70
           +++++
Sbjct: 130 SQQQV 134