Pairwise Alignments

Query, 180 a.a., ECF family RNA polymerase sigma factor from Agrobacterium fabrum C58

Subject, 196 a.a., RNA polymerase sigma factor, sigma-70 family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 74.3 bits (181), Expect = 1e-18
 Identities = 46/151 (30%), Positives = 75/151 (49%), Gaps = 13/151 (8%)

Query: 36  FARRFVRNEDDVNDLVQETMLRGFRSLQGFTPGTALKSWLFTILRNTFCTRYKVSRRECV 95
           FA R   +EDD  DLVQ+T L+ +R +  F  GT  K+WLF IL+N+F   Y+   ++  
Sbjct: 32  FAFRLTFDEDDAKDLVQDTYLKAYRFINSFEQGTNAKAWLFRILKNSFINEYRKKSKQPS 91

Query: 96  GL------------PVGIEQSMSIPADQEWRLQHQEVMRAILELDKDQKKALLLI-AGGT 142
            +             V    +  +  D    +   E+  A+  L  D +  ++L    G 
Sbjct: 92  KVDYQEVETYYNSDSVDYNITSDLRVDAVKDMLGDEISNALNSLAVDFRTVIILCDLEGF 151

Query: 143 SYSDAAAICGCRVGTIKSRVNRARESLRQKL 173
           +Y + A I    +GT++SR++RAR  L++KL
Sbjct: 152 TYEEMAKILDIPIGTVRSRLHRARNLLKEKL 182