Pairwise Alignments

Query, 180 a.a., ECF family RNA polymerase sigma factor from Agrobacterium fabrum C58

Subject, 188 a.a., RNA polymerase sigma factor from Agrobacterium fabrum C58

 Score =  113 bits (283), Expect = 2e-30
 Identities = 61/144 (42%), Positives = 90/144 (62%), Gaps = 1/144 (0%)

Query: 31  PALTAFARRFVRNEDDVNDLVQETMLRGFRSLQGFTPGTALKSWLFTILRNTFCTRYKVS 90
           P L AFA   +R+ D  +DLVQ+T+++ +     F PGT +++WL TILRN F ++ + S
Sbjct: 21  PNLRAFAISLIRSRDRADDLVQDTIMKAWAKQDSFQPGTNMRAWLVTILRNEFYSQIRKS 80

Query: 91  RRECVGLPVGIEQSMSIPADQEWRLQHQEVMRAILELDKDQKKALLLI-AGGTSYSDAAA 149
            RE           +S+P +Q   +  Q+   A+ +L  DQ++A+LLI A G +Y +AA 
Sbjct: 81  GREVQDTDGVYTSRLSVPPEQHGSVDLQDFRTALAKLPDDQREAILLIGASGFAYEEAAE 140

Query: 150 ICGCRVGTIKSRVNRARESLRQKL 173
           ICGC VGTIKSRV+RAR  L++ L
Sbjct: 141 ICGCPVGTIKSRVSRARLRLQELL 164