Pairwise Alignments

Query, 180 a.a., ECF family RNA polymerase sigma factor from Agrobacterium fabrum C58

Subject, 168 a.a., ECF family sigma factor from Agrobacterium fabrum C58

 Score = 76.6 bits (187), Expect = 2e-19
 Identities = 45/141 (31%), Positives = 77/141 (54%), Gaps = 2/141 (1%)

Query: 31  PALTAFARRFVRNEDDVNDLVQETMLRGFRSLQGFTPGTALKSWLFTILRNTFCTRYKVS 90
           PAL  +A     + D  +DLVQ+ + R  R    + P   L+ WL+ +L N +    + S
Sbjct: 13  PALRRYANALTHDRDTADDLVQDCLERAIRKKALWRPQGPLRPWLYRVLVNVYRNNLRGS 72

Query: 91  RRECVGLPV-GIEQSMSIPADQEWRLQHQEVMRAILELDKDQKKALLL-IAGGTSYSDAA 148
           +R    +P+  + + + +PA Q  R+   E+ RAI +L  + ++ LLL +  G +Y++AA
Sbjct: 73  KRRPQQIPIDDVTEQLVVPAAQTGRVALAEMARAIEKLSGEHRETLLLVVVEGLTYAEAA 132

Query: 149 AICGCRVGTIKSRVNRARESL 169
            I    +GT+ SR+ RAR +L
Sbjct: 133 NILEIPLGTLMSRLGRARTAL 153