Pairwise Alignments

Query, 242 a.a., ABC transporter membrane spanning protein from Agrobacterium fabrum C58

Subject, 292 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  145 bits (366), Expect = 9e-40
 Identities = 78/228 (34%), Positives = 133/228 (58%), Gaps = 15/228 (6%)

Query: 9   YVFSPAFFHGALLTLVITVTSLFFGMIAGLIVALLQESRIRPLQIFTLVYLWLFRGTPVL 68
           ++ S A   G + T++++V ++  G++ G+I A+++ S    L+   + Y WLFRGTP++
Sbjct: 66  FLTSEAILWGLVNTIIMSVLAMALGVVIGVITAIMRMSANPILRYVAITYTWLFRGTPLI 125

Query: 69  FQIIFIYNVLPTFGV-------------MLSAFVSAVIALSLNEGAYMAEIIRSGLQAVK 115
            Q++  +N+   F V             +++ FV+A++ LS+N+GAY AE++R+GL +V 
Sbjct: 126 LQLLLWFNLALIFPVIAIPGLFSIDTVDLMTPFVAALLGLSINQGAYTAEVVRAGLLSVD 185

Query: 116 KGQRTAGLALGMTRFAVMCYIVIPQAARIVLPPTGNQMIGMLKTSALVSVVAVEELLLVA 175
            GQ  A  ++GM     +  +++PQA R+++PP GN+ I M+K ++L SV+   ELL  A
Sbjct: 186 TGQYEAAKSIGMPSLQALRRVILPQAMRVIIPPVGNEFISMVKMTSLASVIQYSELLHNA 245

Query: 176 NQTASSNFKYFEALTAAGIYYLALTSIFMGFQYLLERALDRKRPRGKR 223
                +N +  E L  AGI+YLA+ ++    Q  LER     R  GKR
Sbjct: 246 QNIYYANARVMELLIVAGIWYLAVVTVLSFGQSRLERRF--ARGAGKR 291