Pairwise Alignments

Query, 802 a.a., ABC transporter membrane spanning protein from Agrobacterium fabrum C58

Subject, 819 a.a., putative ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  615 bits (1585), Expect = e-180
 Identities = 346/815 (42%), Positives = 491/815 (60%), Gaps = 21/815 (2%)

Query: 5   AFQALLSHWRHRPLQLFTLFVGVALATALWSAVQAINAEARASYDRAASVLAQNQLDQLV 64
           A  ALLSHWR   +Q F++F G+ LATALW+ VQA+N++AR+ Y RA++VL      QL+
Sbjct: 7   ALLALLSHWRRHRVQCFSIFTGLWLATALWTGVQALNSQARSDYARASAVLTGPLQAQLI 66

Query: 65  AKDGSTISSNTYARLRRAGLDVSPIIEGEHRFG---TTRIRLIGIDPLTMPSEGRVLPVG 121
           A++G       Y +LRR G  VSP++EG  R        +RLIGI+PL++P    +  V 
Sbjct: 67  ARNGERFDQALYVQLRRLGWAVSPVLEGRLRLPGEPARSVRLIGIEPLSLPPASSIAGVQ 126

Query: 122 -EPSGLIDFMTAPGVMIVSPATAGTLKDTSGLPIK-----------MAANIPDGAGFVDI 169
            +   L  F+ +PG   V P T   L  + G P +           +   +  G   VDI
Sbjct: 127 VQAFDLQAFVGSPGQAWVGPDTLRQLNTSPGSPTRDSEGQLLPPMVLQPALAPGVIVVDI 186

Query: 170 STADRVLHRNGNLSRIVVSPTQKLDIQAVATVAPELSLKEAGGRSDVARLTDSFHLNLTA 229
             A  +L+  G LSR++++ T        A +A  L L+       + RLTDSFHL+LTA
Sbjct: 187 GHAQTLLNAPGQLSRLLLADTPG---PLPADIARYLELQPRQDDGGLQRLTDSFHLDLTA 243

Query: 230 FGFLAFVVGLFIAYSATGLSFEQRRGTFRTLRSLGIPLSSLTTMLVIEITLFALVAGALG 289
            G LAFVVGLFIA++A GL+ EQRRG  R LR+ G+ L +L   LV+E+ LFA + G  G
Sbjct: 244 LGLLAFVVGLFIAHAAIGLALEQRRGLIRNLRACGVSLKTLLCALVLELGLFAALGGLAG 303

Query: 290 VVLGYVVASTLLPGVAATLSGLYGARVAGSLSIRPEWWLTGLGMALVGTWLSSLQHLYRV 349
           V  GY +A+ LLP VAA+L GLYGA+VAG+LS+   WWL G+ ++++G  L+ L+ + R 
Sbjct: 304 VASGYALAAWLLPDVAASLRGLYGAQVAGTLSLPAGWWLLGVLVSVLGALLAGLESVMRA 363

Query: 350 WRMPILSTAHSRGWTMASVKSLVLQAIAGIFLIALSSLLIWIGSGLLAGFAILAAFLLGA 409
            R+P+L+ A  + W +A    L  QA+    L+ L+      G+GLL+ FA+LA  LL A
Sbjct: 364 ARLPLLALAQPQAWRLAQGPWLQRQALLAGLLLLLALGCGVFGAGLLSAFAMLAGLLLAA 423

Query: 410 AFILPPLLALALRAGERSSRHVLARWFFADTRQQLPGLSLALMALLLALSANIGVGTMVS 469
           A +LP LL   L    R     LA+WF AD+RQQLP LSLAL+ALLLAL+A++GVG+M  
Sbjct: 424 ALLLPALLDQVLAWLARRCHRPLAQWFVADSRQQLPALSLALVALLLALAASVGVGSMTE 483

Query: 470 SFRQTFLRWLDQRLAAEVYVTARDEAEAARLRKWFPDH--ARAVLPIWSTRGEVSGAQVQ 527
            FR+TF+ WLD RL+A++YVT RD A+  ++ +W      A  V+P W    ++ G  VQ
Sbjct: 484 GFRKTFVGWLDLRLSADLYVTPRDTAQGLQIVEWLKQQPGASVVMPGWRADMQLQGWPVQ 543

Query: 528 IFGVADDPTYRDHWPLILGSATTWDEIASGRGALVNEQFWRSGNASLGQKIILPGGWSA- 586
           + G+ D P YR  WPL+   +  W ++ASG+  +++EQ  R  N  LG  + LP G  A 
Sbjct: 544 VQGIVDHPAYRTRWPLLEQHSRAWQQLASGQAVMLSEQLARRLNLQLGDSLKLPAGTPAM 603

Query: 587 TVVGIFSDYGNPMGQVIIGINALNQHYPDVEKLRYGLRVAPDDTADFRRRLIDDFGLPQD 646
            VVGI++DYGNP G V++    L  H+P        + +  +  A  +  L   F L   
Sbjct: 604 PVVGIYADYGNPKGHVLVNAGWLRAHWPQATLAGLSVDLNAEGVASLKAALQQHFALDDS 663

Query: 647 NIVDQASLKRQSAAIFEQTFAVTGALNILTLAVAGFAMFSSLLTLASLRLPQLAPVWALG 706
            +V+QA LKR S  +F +TFA T ALN LTL VAG A+F +LLTL   RL QLAP+WALG
Sbjct: 664 RVVEQARLKRWSTDVFNRTFAATAALNSLTLGVAGVALFINLLTLGQARLGQLAPLWALG 723

Query: 707 LRRRDLAWLEFIRALTLWFVTFVAAIPVGLALAWVLLTIINVEAFGWRLPMILFPWEWVK 766
           +RR  L WL   + L L   T + AIP+GL LAW L+ ++NV+AFGWRLP+ +FP + ++
Sbjct: 724 VRRMQLVWLSLGQTLMLSGFTVLLAIPLGLLLAWCLVAVVNVQAFGWRLPLYVFPVQLLQ 783

Query: 767 LGLVALFAAVISVLIPVRQLAKTAPADLLRVFANE 801
           L ++ +  ++++   P+ QLA+  P +LLR  ++E
Sbjct: 784 LTVLGMLTSLLACAWPLWQLARRPPRELLRPLSDE 818