Pairwise Alignments

Query, 336 a.a., LacI family transcription regulator from Agrobacterium fabrum C58

Subject, 342 a.a., DNA-binding transcriptional repressor (NCBI) from Escherichia coli BW25113

 Score = 53.5 bits (127), Expect = 7e-12
 Identities = 65/258 (25%), Positives = 108/258 (41%), Gaps = 26/258 (10%)

Query: 3   ARKVSITDVAKAAGVSTATVDRVLNNRGGVRADKEDLVLATARALGIDRALDRTPSRALR 62
           A+K++I DVA AAGVS +TV  VL+ +G +     + V A    LG  R    +  R  +
Sbjct: 4   AKKITIHDVALAAGVSVSTVSLVLSGKGRISTATGERVNAAIEELGFVRNRQASALRGGQ 63

Query: 63  ---VAVLMQPPVNPFH----AALREGIDLAGRMYTALNVQFFVHHIDPRKPAAIAAAVRD 115
              + ++++    PF+    A L E ++  GRM       F +H     +  A   ++  
Sbjct: 64  SGVIGLIVRDLSAPFYAELTAGLTEALEAQGRMV------FLLHGGKDGEQLAQRFSLLL 117

Query: 116 CRSYDGLVIT----SPDDIRIREAVAVLSRKMPVVTLATDLTDCGRAAYVGPDDRQAGRV 171
            +  DG+VI     S DD+R      +   K   V  A+  +       V PD+ QA ++
Sbjct: 118 NQGVDGVVIAGAAGSSDDLR-----RMAEEKAIPVIFASRASYLDDVDTVRPDNMQAAQL 172

Query: 172 AGDLMGLFLREG-GRVIVIAGSRDITGHREREEGFRAVLTERYPECSLAAVLETGENQEE 230
              L    +R G  R+  + G        ER  G+ A L +         VLE   +Q++
Sbjct: 173 ---LTEHLIRNGHQRIAWLGGQSSSLTRAERVGGYCATLLKFGLPFHSDWVLECTSSQKQ 229

Query: 231 AGRVVEIAFHDDPALRGI 248
           A   +      +P +  +
Sbjct: 230 AAEAITALLRHNPTISAV 247