Pairwise Alignments

Query, 284 a.a., ABC transporter membrane spanning protein (amino acid) from Agrobacterium fabrum C58

Subject, 319 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  118 bits (295), Expect = 2e-31
 Identities = 85/247 (34%), Positives = 132/247 (53%), Gaps = 20/247 (8%)

Query: 33  LMLALMTLAIGRNQSVQWSEI---PRYMIDPVILGGVILTLELTAGAMVAGIIIGCLVAV 89
           L +A  +L + R   V   ++    R+     ++ G+  TL L+  + + G+IIG    +
Sbjct: 85  LTVADNSLQVARGDDVAEGDVVGVTRHWALGPLMWGLWTTLWLSVVSGILGLIIGLATGL 144

Query: 90  MATSQNIVLKAIAVAFVWWFRGVPLIVQIF-FWFNIALFVPEIGFGSWSVSVNDIVTPAF 148
              S N  L+ ++  +V   RG PL+VQIF F+F I   +               ++  F
Sbjct: 145 CRLSSNPTLRDLSTIYVELVRGTPLLVQIFIFYFFIGTVLN--------------LSREF 190

Query: 149 AGFLALGLHEAANMSEIIRSGLTAVDRGQREAASSLGLRPLQTLRTVVLPQAIRLIVPPT 208
           AG  AL L   A ++EI+R+G+ ++ RGQ EAA SLGL   Q++R VVLPQA + ++PP 
Sbjct: 191 AGIAALSLFTGAYVAEIVRAGVQSITRGQNEAARSLGLSASQSMRHVVLPQAFKRVLPPL 250

Query: 209 GNQAIGMLKASAIVSVIGMQDLLTQAQAIYARNFLVIELL-CVASLWYLGITTIASIGQH 267
             Q I ++K +++VSVI + +LL   + +   +F   E+L CVA L YL I    S    
Sbjct: 251 AGQFISLVKDTSLVSVIAITELLKSGREVITTSFSPFEILFCVAGL-YLLINLPLSKMAS 309

Query: 268 YLERKLA 274
            LER+LA
Sbjct: 310 RLERRLA 316