Pairwise Alignments

Query, 443 a.a., ABC transporter substrate binding protein (sugar) from Agrobacterium fabrum C58

Subject, 440 a.a., ABC transporter for D-Mannitol and D-Sorbitol, periplasmic substrate-binding protein (from data) from Pseudomonas simiae WCS417

 Score = 75.9 bits (185), Expect = 2e-18
 Identities = 86/364 (23%), Positives = 150/364 (41%), Gaps = 23/364 (6%)

Query: 20  LASCVVFTGSTAGAVDFNWRSQEGQTINVLFTNHPWPNAIKDMTSEF-TKKTGIKVRVEI 78
           LAS  + T  T  AV F       QT+ +   N+     ++ ++  F  +   IK+   +
Sbjct: 9   LASTCMMTCMTLSAVSFG-----AQTLTIATVNNSDMIRMQKLSKTFEAEHPEIKLNWVV 63

Query: 79  LNEDPIRARLSTLMQARSSDVDAFISLKIREGAVYNKAGWYADLNPLLKDASLTSPDFNF 138
           L E+ +R RL+T +  +    D  +++ + E A++   GW   +  L          ++ 
Sbjct: 64  LEENVLRQRLTTDIATQGGQFDV-LTIGMYEAALWGAKGWLEPMKDL-------PASYDL 115

Query: 139 EDFGEGLRKNEIFDGKLTGVPINVEGPLFYWRKDIF--AKCNVPEPQYLEDIPAAAKTIS 196
           +D    +R      G L  +P   E  + Y+R D+F  A   +PE      I   A  ++
Sbjct: 116 DDVFPSVRDGLSVKGSLYALPFYAESSITYYRTDLFKDAGLTMPEHPTWTQIGEFASKLT 175

Query: 197 ECDKSVNAWTARGVRN-AIPYPMASFVFNLGGDFKSADKTKPGLCQDKTIAGLQMYGDLL 255
           +  K       RG         + + + N  G     +K +P     +    L  Y D +
Sbjct: 176 DKTKEQYGLCLRGKAGWGENMALITTLANGYGARWFDEKWQPEFNGPEWKDALNFYVDNM 235

Query: 256 KTYGAVGASNHSFPQVVELLGQGKVAMTHESSNEFSNIV-KFPGRAEDLAIKVLPPGKES 314
           K  G  GAS++ F + + L   GK A+  ++S   S +  K   +  D       P +++
Sbjct: 236 KKSGPPGASSNGFNENLALFNSGKCAIWVDASVAGSFVTDKTQSKVADHVGFTFAPHEKT 295

Query: 315 GISKPVAFGWGLSMSNFSKRKEATWLFMQWATSPEIEARLIQA-GVA--PP--RSSVFDG 369
                  + W L++   SK K+A  +F  WATS E    + +  G+A  PP  R S ++ 
Sbjct: 296 DKGTSWLYSWSLAIPTSSKAKDAAKVFTSWATSKEYGELVAKTDGIANVPPGTRKSTYND 355

Query: 370 ADMK 373
             MK
Sbjct: 356 EYMK 359