Pairwise Alignments

Query, 277 a.a., ABC transporter membrane spanning protein (sugar) from Agrobacterium fabrum C58

Subject, 266 a.a., Sugar ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  139 bits (349), Expect = 8e-38
 Identities = 80/266 (30%), Positives = 135/266 (50%), Gaps = 9/266 (3%)

Query: 16  RGGLSTVILVIAAITPILWMILSSFKDRYEVT---KLPPSLFFTPTLDNYRQLFERTEFL 72
           R  ++ ++     + PI W++  SFK   E+     L P  F   TLDNYR +F    + 
Sbjct: 4   RKSMALLLYFFFLLVPIYWLLNMSFKSNAEILGGLTLWPQAF---TLDNYRVIFTDASWY 60

Query: 73  SNTLNSLIVSTGATLLGIMLAFPAAFAVSWHRTTWPATL---ALFSRMAPGTLFLLPWFI 129
           S  +NSL      TL+ +++A PAA+A S +R      L    L +RMAP  +FLLP+F 
Sbjct: 61  SGYINSLYYVCLNTLISLLVALPAAYAFSRYRFLGDRHLFFWLLTNRMAPPAVFLLPFFQ 120

Query: 130 IFSELGLVGSYTVLILTHAVIAMPVALWTMLPYFDAMPRELVEAAQMDGCRPLSVLWRIV 189
           ++S +GL  ++  + L H +  +P+A+W +  +   +PRE+ E A +DG        +I 
Sbjct: 121 LYSSIGLFDTHIAVALAHCLFNVPLAVWILEGFMSGVPREIDETAYIDGYSFPRFFVKIF 180

Query: 190 LPVVMPGVVVSSILCFIFTWNYFLFALALSGFDTKTAIVASFNFIGEGVTNWGALMAAAT 249
           +P++  G+ V++  CF+F+W   L A  L+  + K         +     +WG L AA  
Sbjct: 181 IPLIGSGIGVTAFFCFMFSWVELLLARTLTSVNAKPIAAVMTRTVSASGIDWGVLAAAGV 240

Query: 250 MIALPPLILTLLVQRRLVAGLSAGAV 275
           +  LP +++   V+  +  G + G V
Sbjct: 241 LTILPGMLVIWFVRNHVAKGFALGRV 266