Pairwise Alignments

Query, 466 a.a., two component sensor kinase from Agrobacterium fabrum C58

Subject, 342 a.a., Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 99.0 bits (245), Expect = 2e-25
 Identities = 91/337 (27%), Positives = 159/337 (47%), Gaps = 28/337 (8%)

Query: 143 EQEMRQILEALPAAVYTTDAQGKITYYNRAATELSG--REPVVGQDEWCVT---YRLFTP 197
           ++ + Q    +P A+   D  G+I   N  A    G   + ++GQ    +    YR   P
Sbjct: 9   DEYLGQAFNRIPIAMLVVDKNGEIIRTNELAETSFGYASDELIGQKVEVLLPSRYRHMHP 68

Query: 198 DGQPLPHDQCPMAIALREKRAVRGVEAIAQRPDGTMVPFLPFPTPMFDEDGELIGAINML 257
            G        P A  +   R + G+     R DG   P      P+   +G +I  + ++
Sbjct: 69  -GHRGDFLAKPSARPMGAGRDLSGM-----RKDGREFPVEIAINPVETGEGPMI--LTVI 120

Query: 258 VDISDRKTAETN-------QKVFLDELNHRVKNNMAMLYGLINSAARESRSDEARRVLGD 310
           +D+S+RK  E         + + L E++HRVKNN+ +++ L++  A +  + +   +L D
Sbjct: 121 LDLSERKQNEKRIQDALQQKDLLLKEVHHRVKNNLQVIHSLLDLQALKISNADMVDLLRD 180

Query: 311 AAQRVGAMAAAQQTLYMEKDRTRVNAR----EFLQAVCSSARLAFSKEVALHIDVDAVQL 366
           +  R+ +M+   QTLY  +D  +V+ +    E L  +  S  L+ S++V + I    V+L
Sbjct: 181 SQNRIRSMSLIHQTLYQSQDFAQVDFQLLLGELLPRLTESYGLS-SRQVRIGIQALDVKL 239

Query: 367 PNDVTMPLALVLNELLTNAAKHGCDDAGKCDVWITLSHHDGEFV-LTVRDSGSG--YNFE 423
           P +  +P  L++NEL++NA KHG  +  +  V + +S    + V L++ D G G   + +
Sbjct: 240 PINEAIPCGLIVNELVSNALKHGFPEDRRGTVMVEISQDTEQVVKLSISDDGQGIPLDMD 299

Query: 424 ATGKRSSGTGLVSGLVRQLRGSFSVAPGPGAMCTIRF 460
            +   S G  LV+ L RQL G   V        T+RF
Sbjct: 300 LSKSESLGLQLVNLLTRQLHGQLDVQRRDPTRFTLRF 336



 Score = 26.9 bits (58), Expect = 0.001
 Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 3/54 (5%)

Query: 16 TKQHM---EDYEDFFENGAVALHLVGEDGTILRANRAELDLLGFTAEEYIGRPI 66
          T QH+   E     F    +A+ +V ++G I+R N       G+ ++E IG+ +
Sbjct: 2  TAQHLALDEYLGQAFNRIPIAMLVVDKNGEIIRTNELAETSFGYASDELIGQKV 55