Pairwise Alignments

Query, 466 a.a., two component sensor kinase from Agrobacterium fabrum C58

Subject, 642 a.a., two component sensor kinase from Agrobacterium fabrum C58

 Score = 93.2 bits (230), Expect = 2e-23
 Identities = 106/438 (24%), Positives = 184/438 (42%), Gaps = 28/438 (6%)

Query: 10  VRTAVPTKQHMEDYEDFFENGAVALHLVGEDGTILRANRAELDLLGFTAEEYIGRPISQ- 68
           V+     ++  E     F   AV + L    G ++  N     ++G   +E IG  +   
Sbjct: 197 VKADAALRESEERLRAIFAQSAVGIALGDLTGKLISVNDHFCQIVGRRRDELIGIQMQDI 256

Query: 69  -FHADSDTIREILARLSGGEKLNRFPARLRAKDGSIRYV-EITSSVQFRDGKFLNTRCFT 126
            F  D    + +   +    +      R    DGS+ +V    S+++   G        +
Sbjct: 257 TFAEDLPENQRLFKHMVETGESFEIEKRYVRGDGSLVWVLNSVSAIRDDQGNMSQAVAIS 316

Query: 127 IDVTDTVQLRRQLARKEQEMRQILEALPAAVYTTDAQGKITYYNRAATELSG--REPVVG 184
            D+ +    RR     E+ +  ++ +   A+   D    IT +N AA +L G   + VVG
Sbjct: 317 ADIGE----RRHAQEVERHLASMIASSNDAILGIDLDMTITSWNAAAEKLYGYSEDEVVG 372

Query: 185 QDEWCVTYRLFTPDGQPLPHDQCPMAIALREKRAVRGVEAIAQRPDGTMVPFLPFPTPMF 244
           +     T  +  PD +    ++  +   ++  R V   E    R DG +V  L   +P+ 
Sbjct: 373 R-----TVLMLVPDDRQ--EEEPTILRQIKAGRIVEPYETQRLRKDGRLVEVLLSVSPIR 425

Query: 245 DEDGELIGAINMLVDISDRKTAETNQKVFLDELNHRVKNNMAMLYGLI-NSAARESRSDE 303
           D +G +IGA     DI+ RK A+  + + ++EL+HRVKN +A +  +   +  R+  + E
Sbjct: 426 DVNGRVIGASKTAHDITARKDADRLRSILVNELHHRVKNILATVTAIARQTIGRDKANHE 485

Query: 304 ARRVLGDAAQRVGAMAAAQQTLYMEKDRTRVNAREFLQAVCSSARLAFSKEVALHIDVDA 363
                     R+G+++ AQ  L +  D    + R  LQ   S     +  E +  I    
Sbjct: 486 DMEAF---TSRLGSLSRAQD-LLVHADWQHADLRAVLQQALS----PYPAE-SFQISGPG 536

Query: 364 VQLPNDVTMPLALVLNELLTNAAKHGCDDAGKCDVWITLSHH--DGEFVLTVRDSGSGYN 421
           V LP    + L+L L+EL TNAAK+G     +  V I+      DGE +  V +   G  
Sbjct: 537 VSLPPRAVVSLSLALHELATNAAKYGALSVPEGQVSISWQRQGTDGERLRVVWEERGGPE 596

Query: 422 FEATGKRSSGTGLVSGLV 439
             +  ++  G+ LV  L+
Sbjct: 597 VMSPQRKGFGSTLVERLL 614



 Score = 43.9 bits (102), Expect = 2e-08
 Identities = 41/167 (24%), Positives = 71/167 (42%), Gaps = 12/167 (7%)

Query: 105 YVEIT-SSVQFRDGKFLNTRCFTIDVTDTVQLRRQLARKEQEMRQILEALPAAVYTTDAQ 163
           Y +I+ S V  +DG      C   + T+ V+    L   E+ +R I       +   D  
Sbjct: 168 YFDISYSPVTDQDGIVRGVFCIVNETTERVKADAALRESEERLRAIFAQSAVGIALGDLT 227

Query: 164 GKITYYNRAATELSG--REPVVGQDEWCVTYRLFTPDGQPLPHDQCPMAIALR-EKRAVR 220
           GK+   N    ++ G  R+ ++G     +T+    P+ Q L         +   EKR VR
Sbjct: 228 GKLISVNDHFCQIVGRRRDELIGIQMQDITFAEDLPENQRLFKHMVETGESFEIEKRYVR 287

Query: 221 GVEAIAQRPDGTMVPFLPFPTPMFDEDGELIGAINMLVDISDRKTAE 267
           G        DG++V  L   + + D+ G +  A+ +  DI +R+ A+
Sbjct: 288 G--------DGSLVWVLNSVSAIRDDQGNMSQAVAISADIGERRHAQ 326