Pairwise Alignments

Query, 411 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 381 a.a., GGDEF domain protein from Pseudomonas putida KT2440

 Score =  106 bits (265), Expect = 1e-27
 Identities = 75/200 (37%), Positives = 99/200 (49%), Gaps = 14/200 (7%)

Query: 188 FTGLIGSITLVFSVVIATTYEAIEKYRRYANL-------DPLTNLLNRRGLDAVLASAQG 240
           F   + S T   S  + T +    + +R   L       D LT L NRR      ASAQ 
Sbjct: 176 FAWFVVSATQSLSSALTTAWRLKHEMQRAHRLAMVASCTDELTGLNNRRAFFDN-ASAQH 234

Query: 241 ERLKKPAT--AIILADIDHFKAINDRFGHSFGDLVIKRFGALVQSHTTTQGCVARLGGEE 298
            R +   T  A+++ D+DHFK IND FGH+ GD V++R GA + +         RLGGEE
Sbjct: 235 VRCRDAGTFMAVLMLDVDHFKQINDTFGHAAGDQVLQRIGAAISASLRDNDIAGRLGGEE 294

Query: 299 FAVLLPDTCLDDAIAAAEKMRRSFAAERWPCDRKESEFTASFGVALVE-DGEALSTAFER 357
           FA+LLP+T  D AI  AE++R   A  R      E   TAS G+A  +     L      
Sbjct: 295 FAILLPNTPPDTAIEVAERLRALIAKLR---VNDEHPVTASIGLAFAKAPATELGALLSS 351

Query: 358 ADQFLYAAKRMGRNRVAAAK 377
           AD  +Y +K  GRNRV  A+
Sbjct: 352 ADSAMYLSKVSGRNRVTVAE 371