Pairwise Alignments

Query, 502 a.a., TnpA family transposase from Agrobacterium fabrum C58

Subject, 1004 a.a., putative transposase from Pseudomonas putida KT2440

 Score =  148 bits (374), Expect = 8e-40
 Identities = 117/464 (25%), Positives = 210/464 (45%), Gaps = 9/464 (1%)

Query: 17  LGVQADGAQWLAEARQMLDFNLQRLAHRARSGKLEGVRLEAGTLIITPTAS-EIPAAAEA 75
           +G+     +++A  +  L+   Q+L  +  S + +    EAG  ++   A+ +IP +A +
Sbjct: 509 MGLPGTAKEFVASLKTQLEETAQQLDEKFPSCRGDVSINEAGEPVLRRVAARDIPPSAIS 568

Query: 76  LNAEISDMYPLVEVPDLLREVHEWTGFADQFTHVRTGDVPK---NVSAMLAGVLADATNL 132
           L   +    P   V D++  +  W  F   F  + +G+ PK        L  + A   NL
Sbjct: 569 LQTALMQRMPARHVLDIMANIEHWIQFTRHFGPM-SGNEPKLKEPAERYLMTIFAMGCNL 627

Query: 133 GPKRMAGASKG-ISAHQIGWMRTFHARSETYRTAQACITDAHTQHPHSRLWGNGTTSSSD 191
           GP + A    G ++ H + +    H   E    A   + + + Q    +LWG+G   ++D
Sbjct: 628 GPSQAARHLTGNVTPHMLSYTNRRHLSLEKLDKANRELVELYLQLDLPKLWGDGKAVAAD 687

Query: 192 GQFFRASDRAAKRGDINLHYGSEPGSKFYSHLSDQYGYFSILPISPTESEAAYVLDGLFD 251
           G  F   D     G  +  Y  + G+  Y H+++ Y       I P   EA YV++GL  
Sbjct: 688 GTQFDFYDDNLLAG-YHFRY-RKMGAVAYRHVANNYIAVFQHFIPPGIWEAIYVIEGLLK 745

Query: 252 QDTVLDIQEHFTDTGGASDHMFGLFALIGKRFSPRLRNLKDRKFHTFEKGDAYPALSNHI 311
            D  ++    ++DT G S  +F    L+G    PR+RN +D      ++G +Y  ++   
Sbjct: 746 ADLSVEADTVYSDTQGQSATVFAFTHLLGINLMPRIRNWRDLVMCRPDRGASYKHINRLF 805

Query: 312 GAPINANLILDHWDDLLHLAASITTRSVVPSTILKKLSATPKQSHLARALREFGRIERSL 371
               + NLI  HW DL+ +A SI    +    +L+KL +  +++ L  A +  G + R++
Sbjct: 806 TDTADWNLIETHWQDLMQVALSIQAGKISSPMLLRKLGSYSRRNKLYHAAQALGSVIRTI 865

Query: 372 FMIEWYSSPALRRRCQAGLNKGEAAHKLKRAVFFHERGEIRDRSFESQAFRASGLNLVVS 431
           F++ W  S  LR+   A  NK E+ +   + + F     I +   + Q  R    ++V S
Sbjct: 866 FLLNWIGSRELRQEVTANTNKIESYNGFSKWLSF-GGDVIAENDPDEQQKRLRYNDMVAS 924

Query: 432 AIVHWNTVYLDRAITQLKREGRNIPDTLLKHISPLSWEHINLTG 475
           +++  NTV + R + +L REG    D  +  +SP    ++   G
Sbjct: 925 SVILQNTVDMMRILHKLAREGWQFTDEDVSFLSPYLTSNVKRFG 968