Pairwise Alignments

Query, 535 a.a., ABC transporter nucleotide binding/ATPase (oligopeptide) from Agrobacterium fabrum C58

Subject, 542 a.a., peptide ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  310 bits (793), Expect = 1e-88
 Identities = 187/531 (35%), Positives = 287/531 (54%), Gaps = 18/531 (3%)

Query: 1   MLLKIDNLKVEAKGEEGWSPI-LHGINLEVRRGEVVGLIGESGAGKSTLGLAALGFAHAG 59
           +LL +++LK+   GE G  P+ +  ++  +  GE+V L+GESG+GK+    AA+G     
Sbjct: 6   VLLNVEHLKIRV-GEHG--PLAVDDLSFSIAPGEIVALVGESGSGKTMAARAAIGLLPLP 62

Query: 60  LRFAGGRVLVENVDLLRLTERERSAYRGRRVAYVAQSAAASFNPAWQLLDQFCEGPAIHG 119
           ++  GGR+  +  DL  ++     A RG  +  V Q    S NPA ++  Q  E   +H 
Sbjct: 63  MQVCGGRLDFQGRDLASVSTEALRAIRGASIGMVFQEPMVSLNPALKIGQQMSEALKLHT 122

Query: 120 TASRPDCEILARQLYASMQLPDAANFGLRFPHQVSGGQLQRAMVAMAMACKPDLIVFDEP 179
               P        +   + +  A      +PHQ SGG  QR M+A  M  +P L++ DEP
Sbjct: 123 DLDPPQIRERCLTMLRRIGIKAAERCLESYPHQFSGGMRQRIMLASVMLLRPALLIADEP 182

Query: 180 TTALDVTTQIGVLTAIRSAVETSETAAIYITHDLAVVAQMADRIKVMRHGREVEEAPTRQ 239
           TTALD   Q+ V+  +        TA ++I+HDL++VA+ A ++ VMRHG+ VE+     
Sbjct: 183 TTALDCLAQLDVIELMLELTREQGTAILFISHDLSLVARYAHKVVVMRHGKAVEQGSIED 242

Query: 240 IMQSPREDYTRSLWAVREFHRPERRLERNDAPVISINNV-------TASYG---HFDVLR 289
           I+ +P+ +YTR L            L  ++ P++ ++ V       T  +G   H  V+ 
Sbjct: 243 ILLAPKAEYTRQLLEALPRRGVLAPLPVSNEPLVEVDQVCIEHPGPTTFWGKRQHTRVVH 302

Query: 290 DVAFEIPRGATVAVVGESGSGKSTAARVVTGLLPPRIGSITLNGEVLPPSFSRRSREQLR 349
             +  I  G T+A+VG SGSGK+T  R + GL+ P  GSI   G  +  + +R  R Q  
Sbjct: 303 SASLVIAPGETLALVGGSGSGKTTLGRSLVGLIKPCAGSIRFKGVDILKAANRTHRLQC- 361

Query: 350 KIQMIYQMADTALNPRQSIRQILCRPLQFYVGLKGAALERRLGELMEQIELSPRQFLHRV 409
             QMI+Q   ++LNPR  I +IL  PL+   GL  A    R+ + ++ I L   QF+ R 
Sbjct: 362 --QMIFQDPYSSLNPRMKIGEILAEPLRHEPGLNAAERRERVTQTLKDIGLG-EQFVERF 418

Query: 410 PGELSGGQKQRIGIARALAANPEIIICDEVTSALDQLVAEGILRLLSRLQDETGISYMFI 469
           P +LSGGQ+QR+ I RAL  +P+++I DE  SALD  + + IL L  RLQ + G + +FI
Sbjct: 419 PHQLSGGQRQRVAIGRALVRHPQLVIADEPISALDMTIQKQILELFERLQAQYGFACLFI 478

Query: 470 THDIDTVRAIADDVVVMKSGTVQDKGSKAEVMDPPRHHYTRQLLASVPQMD 520
           +HD+  V  IA  V VM  G V + G++ ++ D P+H YTRQLLA+   ++
Sbjct: 479 SHDLAAVERIAHRVAVMHQGNVVEVGAREQIFDHPQHPYTRQLLAAASPLE 529